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L3_083_038G1_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_038G1_scaffold_136_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1901)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=A0ZZB8_BIFAA
Domain of unknown function (DUF1906).
Uncharacterized protein {ECO:0000313|EMBL:CBK71321.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_083_038G1_scaffold_136_2
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1996..2226)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR51_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18229.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_083_038G1_scaffold_136_3
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2226..2822)
DNA (597bp) protein (199aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Bifidobacterium RepID=C2GXY5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCY18228.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_083_038G1_scaffold_136_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3225..4310
DNA (1086bp) protein (362aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=S3DM78_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65707.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_083_038G1_scaffold_136_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4555..4722
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GXY8_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65706.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_083_038G1_scaffold_136_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4719..6551
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXV2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEI80006.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L3_083_038G1_scaffold_136_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6652..6876
DNA (225bp) protein (75aa)
Truncated phosphoenolpyruvate carboxylase n=7 Tax=Bifidobacterium RepID=E8MG01_BIFL2
truncated phosphoenolpyruvate carboxylase
Phosphoenolpyruvate carboxylase-like protein {ECO:0000313|EMBL:CCY96377.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_083_038G1_scaffold_136_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7043..8692)
DNA (1650bp) protein (550aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBK71323.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK71323.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAX0_BIFLN
L3_083_038G1_scaffold_136_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8907..9905)
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium longum RepID=C2GXZ2_BIFLN
LacI family transcription regulator
LacI family transcription regulator {ECO:0000313|EMBL:AIW43114.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_083_038G1_scaffold_136_10
unknown

Not on your lists

comp(10537..10743)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_083_038G1_scaffold_136_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11181..11747
DNA (567bp) protein (189aa)
Major facilitator superfamily transporter n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXU7_9BIFI
transport protein
Putative permease {ECO:0000313|EMBL:ACD98850.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_083_038G1_scaffold_136_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11864..13780)
DNA (1917bp) protein (639aa)
Thioredoxin-disulfide reductase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXU6_9BIFI
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EFV37584.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
thioredoxin reductase
L3_083_038G1_scaffold_136_13
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13995..14558)
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:KFI83822.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KFI83822.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Peroxiredoxin n=4 Tax=Bifidobacterium longum RepID=D6DAX5_BIFLN
alkyl hydroperoxide reductase
L3_083_038G1_scaffold_136_14
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15003..15767
DNA (765bp) protein (255aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Carbonic anhydrase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX76_BIFLJ
carbonate dehydratase
L3_083_038G1_scaffold_136_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15888..17024)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000309D265
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51165.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_038G1_scaffold_136_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17243..18586
DNA (1344bp) protein (448aa)
CBS domain pair n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXU3_9BIFI
membrane protein
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:BAP82695.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_083_038G1_scaffold_136_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18683..19162
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage n=18 Tax=Bifidobacterium RepID=B3DNZ6_BIFLD
dps; dps
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:CBK71331.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_083_038G1_scaffold_136_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19397..20710
DNA (1314bp) protein (438aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B7GSI4_BIFLS
hypothetical protein
Putative AAA+ superfamily ATPase {ECO:0000313|EMBL:ACD98856.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_083_038G1_scaffold_136_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20969..21334)
DNA (366bp) protein (122aa)
Gluconate kinase n=16 Tax=Bifidobacterium RepID=B3DP00_BIFLD
gntK2; gntk2
Probable gluconokinase {ECO:0000313|EMBL:AAN24443.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_083_038G1_scaffold_136_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21421..22236)
DNA (816bp) protein (272aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium RepID=D6DAY2_BIFLN
Predicted metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CBK71335.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_083_038G1_scaffold_136_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22364..23689)
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase n=3 Tax=Bifidobacterium longum RepID=B3DP03_BIFLD
gabT; 4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACD98862.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_083_038G1_scaffold_136_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24098..25696
DNA (1599bp) protein (533aa)
Transcriptional regulator n=3 Tax=Bifidobacterium RepID=F8APB5_BIFLN
transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KEY24033.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_083_038G1_scaffold_136_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26088..26423
DNA (336bp) protein (112aa)
Transposase n=7 Tax=Bifidobacterium longum subsp. longum RepID=E4R1L9_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71338.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_083_038G1_scaffold_136_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26999..27244)
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B3DP07_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY24035.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_083_038G1_scaffold_136_25
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27358..28269)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E968_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EFV37572.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_083_038G1_scaffold_136_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28220..28816)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G6L3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV32647.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_083_038G1_scaffold_136_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29077..30069
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=V6XW25_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV32646.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_083_038G1_scaffold_136_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30084..31418)
DNA (1335bp) protein (445aa)
Aspartate/tyrosine/aromatic aminotransferase n=13 Tax=Bifidobacterium RepID=B3DP11_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43103.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_083_038G1_scaffold_136_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31624..32058
DNA (435bp) protein (145aa)
Transcriptional regulator n=19 Tax=Bifidobacterium RepID=B3DP12_BIFLD
transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KEY24040.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_083_038G1_scaffold_136_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32377..33723
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=18 Tax=Bifidobacterium RepID=B3DP13_BIFLD
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying items 1-30 of 46 in total

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