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L3_083_059G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_20_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

125..376
DNA (252bp) protein (84aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS28_9CLOT
Kinase to dihydroxyacetone kinase {ECO:0000313|EMBL:KGJ53027.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_059G1_scaffold_20_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1090..3123)
DNA (2034bp) protein (678aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
UvrD/REP helicase N-terminal domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P6W4_CLODI
UvrD/REP helicase
L3_083_059G1_scaffold_20_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3307..3894)
DNA (588bp) protein (196aa)
N-acetylmuramoyl-L-alanine amidase n=7 Tax=Firmicutes RepID=E4LS33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86166.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
cell wall hydrolase/autolysin
L3_083_059G1_scaffold_20_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4088..4933
DNA (846bp) protein (282aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86165.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_059G1_scaffold_20_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5042..5800
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLD5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ53031.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
ABC transporter ATP-binding protein
L3_083_059G1_scaffold_20_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5784..6515
DNA (732bp) protein (244aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LS36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38526.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter permease
L3_083_059G1_scaffold_20_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6726..7148)
DNA (423bp) protein (141aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=H1AUK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84986.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_059G1_scaffold_20_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7316..7741
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VLD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY86161.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_059G1_scaffold_20_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7928..8785)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY86160.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
phosphonate ABC transporter permease
L3_083_059G1_scaffold_20_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8785..9573)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLD0_9FIRM
Phosphonate ABC transporter, permease PhnE {ECO:0000313|EMBL:ENY86159.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
phosphonate ABC transporter, permease PhnE
L3_083_059G1_scaffold_20_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9570..10358)
DNA (789bp) protein (263aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AUK4_9FIRM
phosphonate ABC transporter, ATP-binding protein
L3_083_059G1_scaffold_20_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10651..11757)
DNA (1107bp) protein (369aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=2 Tax=Clostridiales RepID=E4LS42_9CLOT
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EFR38322.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_059G1_scaffold_20_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11754..12455)
DNA (702bp) protein (234aa)
UbiC transcription regulator-associated domain protein n=4 Tax=Firmicutes RepID=E4LS43_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ53039.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
transcriptional regulator
L3_083_059G1_scaffold_20_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12694..13122)
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38496.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_059G1_scaffold_20_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13134..14354)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLC4_9FIRM
Membrane protein {ECO:0000313|EMBL:KGJ53041.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
sodium transport system permease
L3_083_059G1_scaffold_20_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14351..15268)
DNA (918bp) protein (306aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LS46_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ63448.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sodium transport system ATP-binding protein
L3_083_059G1_scaffold_20_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15416..15643
DNA (228bp) protein (76aa)
DNA-binding helix-turn-helix protein n=7 Tax=Firmicutes RepID=E4LS47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85003.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
XRE family transcriptional regulator
L3_083_059G1_scaffold_20_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15645..16535
DNA (891bp) protein (297aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LS48_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EQJ63450.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_059G1_scaffold_20_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16657..17979)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLC0_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:ENY86150.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative HAD hydrolase, IIB family
L3_083_059G1_scaffold_20_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18592..21183)
DNA (2592bp) protein (864aa)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium sp. HGF2 RepID=E4LS51_9CLOT
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EFR38379.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cation-transporting ATPase, P-type
L3_083_059G1_scaffold_20_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21521..23563
DNA (2043bp) protein (681aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6USP9_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDC85009.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative ggdef domain-containing protein
L3_083_059G1_scaffold_20_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23855..25489)
DNA (1635bp) protein (545aa)
CBS domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LS54_9CLOT
CBS domain protein {ECO:0000313|EMBL:EFR38344.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
manganese-dependent inorganic pyrophosphatase
L3_083_059G1_scaffold_20_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25663..26082
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ53049.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_083_059G1_scaffold_20_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26199..27404)
DNA (1206bp) protein (402aa)
DNA-binding helix-turn-helix protein n=4 Tax=Firmicutes RepID=E4LS56_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ63459.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
membrane-anchored DNA-binding protein
L3_083_059G1_scaffold_20_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27484..28233)
DNA (750bp) protein (250aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFR38566.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EFR38566.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
N-acetylmuramoyl-L-alanine amidase n=5 Tax=Firmicutes RepID=E4LS57_9CLOT
N-acetylmuramoyl-L-alanine amidase
L3_083_059G1_scaffold_20_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28345..29556)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ63461.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative membrane protein
L3_083_059G1_scaffold_20_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29618..33124)
DNA (3507bp) protein (1169aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Pyruvate-flavodoxin oxidoreductase n=6 Tax=Firmicutes RepID=E4LS59_9CLOT
pyruvate:ferredoxin (flavodoxin) oxidoreductase
L3_083_059G1_scaffold_20_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33333..40622)
DNA (7290bp) protein (2430aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LS60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38331.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_059G1_scaffold_20_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(40715..40849)
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85025.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_059G1_scaffold_20_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40882..41688)
DNA (807bp) protein (269aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LS62_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EQJ63465.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Displaying items 1-30 of 176 in total

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