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L3_083_059G1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_75_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

L3_083_059G1_scaffold_75_2
GWC1_OD1_36_108, Parcubacteria, Bacteria

Not on your lists

comp(356..1822)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=17 Tax=Vibrio cholerae RepID=F9BHU1_VIBCL
Uncharacterized protein {ECO:0000313|EMBL:KKP89565.1}; TaxID=1618894 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_108.;"
L3_083_059G1_scaffold_75_3
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..2613)
DNA (738bp) protein (246aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Pseudomonas sp. GM78 RepID=J3I970_9PSED
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:EJN18793.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
ABC transporter
L3_083_059G1_scaffold_75_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2627..3421)
DNA (795bp) protein (265aa)
ABC-2 type transporter n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT53_9BACT
ABC transporter permease {ECO:0000313|EMBL:KIF62178.1}; Strain MEP34 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94863.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
ABC-2 type transporter
L3_083_059G1_scaffold_75_5
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3686..4906)
DNA (1221bp) protein (407aa)
Rhamnan synthesis F n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YWI3_DESAF
Rhamnan synthesis F
Rhamnan synthesis F {ECO:0000313|EMBL:EGJ49369.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
L3_083_059G1_scaffold_75_6
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5049..5894)
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Sutterella sp. CAG:351 RepID=R7IKP2_9BURK
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDE52319.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:351.;"
dTDP-4-dehydrorhamnose reductase
L3_083_059G1_scaffold_75_7
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6023..6568)
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Sutterella sp. CAG:351 RepID=R7IL63_9BURK
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDE52320.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:351.;"
L3_083_059G1_scaffold_75_8
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6581..7453)
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J4J4_DESDA
glucose-1-phosphate thymidylyltransferase
L3_083_059G1_scaffold_75_9
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7456..8520)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V3P9_9DELT
dTDP-glucose 4,6-dehydratase
L3_083_059G1_scaffold_75_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8534..9427)
DNA (894bp) protein (298aa)
Putative uncharacterized protein (Fragment) n=3 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UXJ6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49557.1}; Flags: Fragment;; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glycosyltransferase
L3_083_059G1_scaffold_75_11
unknown

Not on your lists

comp(11313..11480)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_083_059G1_scaffold_75_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11625..11762)
DNA (138bp) protein (46aa)
Cell filamentation protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y922_BILWA
Cell filamentation protein {ECO:0000313|EMBL:EFV43499.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
L3_083_059G1_scaffold_75_13
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11944..12168)
DNA (225bp) protein (75aa)
Fic family protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQ18_9DELT
Fic family protein {ECO:0000313|EMBL:EEB34921.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
cell filamentation protein Fic-like protein
L3_083_059G1_scaffold_75_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12280..12609)
DNA (330bp) protein (110aa)
Peptidase family T4 n=2 Tax=Clostridiales RepID=A5ZXR6_9FIRM
Peptidase family T4 {ECO:0000313|EMBL:EDM85585.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L-aminopeptidase/D-esterase
L3_083_059G1_scaffold_75_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13429..14355
DNA (927bp) protein (309aa)
ltrA1; hypothetical protein (EC:2.7.7.49)
Mobile mitochondrial group II intron of COX1 which is involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA {ECO:0000313|EMBL:CAP44634.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CAP44634.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Mobile mitochondrial group II intron of COX1 which is involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IAV6_BORPD
L3_083_059G1_scaffold_75_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15930..16298)
DNA (369bp) protein (123aa)
transposase IS5 n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B72F48
Uncharacterized protein {ECO:0000313|EMBL:EFV42540.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
transposase
L3_083_059G1_scaffold_75_17
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16999..18402
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y507_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44774.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
peptidase M23
L3_083_059G1_scaffold_75_18
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18615..19169)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y506_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44773.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
CMP/dCMP deaminase zinc-binding protein
L3_083_059G1_scaffold_75_19
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19540..20472
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y505_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44772.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
thiamine biosynthesis protein
L3_083_059G1_scaffold_75_20
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20469..21239
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1UZM9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW42510.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
nitrate ABC transporter, ATP-binding protein (nrtC-1)
L3_083_059G1_scaffold_75_21
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21227..21727
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1UZN0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW42511.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
membrane protein AbrB
L3_083_059G1_scaffold_75_22
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21970..22728
DNA (759bp) protein (253aa)
NitT/TauT family transport system permease n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y502_BILWA
NitT/TauT family transport system permease {ECO:0000313|EMBL:EFV44769.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
binding-protein-dependent transport systems inner membrane component
L3_083_059G1_scaffold_75_23
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22728..23102
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y501_BILWA
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
crcB; crcB protein
L3_083_059G1_scaffold_75_24
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23116..23523
DNA (408bp) protein (136aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y500_BILWA
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
crcB; camphor resistance CrcB protein
L3_083_059G1_scaffold_75_25
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23604..23885
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y4Z9_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW42515.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_083_059G1_scaffold_75_26
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24156..25175
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y4Z8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW42516.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
permease
L3_083_059G1_scaffold_75_27
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25802..27244
DNA (1443bp) protein (481aa)
Peptidase Do n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y4Z7_BILWA
Peptidase Do {ECO:0000313|EMBL:EFV44764.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
htrA; trypsin domain/PDZ domain-containing protein
L3_083_059G1_scaffold_75_28
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28257..29651)
DNA (1395bp) protein (465aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y4Z6_BILWA
L3_083_059G1_scaffold_75_29
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29670..30899)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y4Z5_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44963.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
ribosomal small subunit Rsm22
L3_083_059G1_scaffold_75_30
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31139..32317)
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y4Z4_BILWA
Displaying items 1-30 of 113 in total

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