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L3_083_059G1_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_164_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..3505)
DNA (3504bp) protein (1168aa)
Repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ2_9FIRM
Repeat protein {ECO:0000313|EMBL:EHM37533.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cell surface protein
L3_083_059G1_scaffold_164_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..4231)
DNA (570bp) protein (190aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DK75_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERI80086.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
NUDIX hydrolase
L3_083_059G1_scaffold_164_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4218..4715)
DNA (498bp) protein (166aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ0_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:EHM37531.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_059G1_scaffold_164_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4728..5558)
DNA (831bp) protein (277aa)
Thymidylate synthase {ECO:0000256|SAAS:SAAS00215270}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00273274};; EC=2.1.1.45 {ECO:0000256|SAAS:SAAS00215290};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXI9_9FIRM
L3_083_059G1_scaffold_164_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5710..6261
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34247.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_164_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6274..7683)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34246.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase S41
L3_083_059G1_scaffold_164_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7680..8972)
DNA (1293bp) protein (431aa)
tRNA methylthiotransferase YqeV n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DK80_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EHO34245.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_164_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9140..9385
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34244.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
HPr-related phosphotransferase system component
L3_083_059G1_scaffold_164_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9488..10072
DNA (585bp) protein (195aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34243.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_059G1_scaffold_164_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10116..10385
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0372_04252 n=3 Tax=Clostridiales RepID=G9YXI4_9FIRM
UPF0237 protein HMPREF0995_02049 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ACT domain-containing protein
L3_083_059G1_scaffold_164_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10989..12347
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0372_03785 n=3 Tax=Clostridiales RepID=G9YW69_9FIRM
UPF0210 protein HMPREF0995_02047 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_164_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12501..13829
DNA (1329bp) protein (443aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW68_9FIRM
L3_083_059G1_scaffold_164_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13949..14362
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YW67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55349.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_164_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14541..14774
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YW66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34237.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_059G1_scaffold_164_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14959..15993)
DNA (1035bp) protein (345aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW65_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM39393.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator, XRE family
L3_083_059G1_scaffold_164_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16169..16927)
DNA (759bp) protein (253aa)
PP-loop family protein n=2 Tax=Clostridiales RepID=U2ARY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55345.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
PP-loop domain-containing protein
L3_083_059G1_scaffold_164_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17150..17581
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=2 Tax=Clostridiales RepID=G9YW62_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rplM; 50S ribosomal protein L13
L3_083_059G1_scaffold_164_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17599..18003
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=3 Tax=Clostridiales RepID=G9YW61_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsI; 30S ribosomal protein S9
L3_083_059G1_scaffold_164_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18555..18809
DNA (255bp) protein (85aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQL3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB88112.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative transcriptional regulator
L3_083_059G1_scaffold_164_20
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18834..19043)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SX81_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY56941.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_083_059G1_scaffold_164_21
unknown

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19216..19443
DNA (228bp) protein (76aa)

This feature has no annotations

L3_083_059G1_scaffold_164_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19493..19951
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q4S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57785.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_083_059G1_scaffold_164_23
unknown

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20010..20390
DNA (381bp) protein (127aa)

This feature has no annotations

L3_083_059G1_scaffold_164_24
unknown

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20407..20616
DNA (210bp) protein (70aa)

This feature has no annotations

L3_083_059G1_scaffold_164_25
unknown

Not on your lists

20624..20878
DNA (255bp) protein (85aa)

This feature has no annotations

L3_083_059G1_scaffold_164_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

20895..21353
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88103.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_083_059G1_scaffold_164_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21490..21702
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28380.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_083_059G1_scaffold_164_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21708..22028
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P634_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13191.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_083_059G1_scaffold_164_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22169..22486)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YN76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23866.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_164_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22489..22761)
DNA (273bp) protein (91aa)
Holin, phage phi LC3 family n=3 Tax=Clostridiales RepID=G9YN75_9FIRM
Phage phi LC3 family holin {ECO:0000313|EMBL:EHO23867.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
holin, phage phi LC3 family
Displaying items 1-30 of 108 in total

View Taxonomy