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L3_083_059G1_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_166_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..304
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50774.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
fibronectin type III domain-containing protein
L3_083_059G1_scaffold_166_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

457..2001
DNA (1545bp) protein (515aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CG41_9CLOT
L3_083_059G1_scaffold_166_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2295..2783)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76738.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Helix-turn-helix.
L3_083_059G1_scaffold_166_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3087..3290
DNA (204bp) protein (68aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=G9YQU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ47368.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_083_059G1_scaffold_166_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3293..4375
DNA (1083bp) protein (361aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHM50778.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Site-specific recombinase XerD
L3_083_059G1_scaffold_166_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4380..4715
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=G9YQU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50779.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_083_059G1_scaffold_166_7
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4705..5880
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59378.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_083_059G1_scaffold_166_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6314..6559
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=R0B4A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52820.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_166_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6617..6922)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67481.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Helix-turn-helix.
L3_083_059G1_scaffold_166_10
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7039..7515
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CI75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76368.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_083_059G1_scaffold_166_11
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7556..7741
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K4X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38968.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_083_059G1_scaffold_166_12
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7734..10730
DNA (2997bp) protein (999aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K4X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38967.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Type II restriction enzyme, methylase subunit
L3_083_059G1_scaffold_166_13
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10746..12371
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K4X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38966.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
putative DNA methylase (modification methylase) (methyltransferase)
L3_083_059G1_scaffold_166_14
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12386..13486
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FW52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA86249.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein
L3_083_059G1_scaffold_166_15
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13483..14130
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FW53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA86250.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein
L3_083_059G1_scaffold_166_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14662..16413)
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25926.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
multidrug ABC transporter ATPase and permease
L3_083_059G1_scaffold_166_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16430..18223)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
multidrug ABC transporter ATPase and permease
L3_083_059G1_scaffold_166_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18281..18898)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52770.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator, TetR family
L3_083_059G1_scaffold_166_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19297..19602
DNA (306bp) protein (102aa)
Putative arsenical resistance operon repressor n=3 Tax=Clostridiales RepID=G9YPM2_9FIRM
Putative arsenical resistance operon repressor {ECO:0000313|EMBL:ERI63326.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ArsR family transcriptional regulator
L3_083_059G1_scaffold_166_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19697..20704
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25922.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted permeases
L3_083_059G1_scaffold_166_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20718..21086
DNA (369bp) protein (123aa)
Redox-active disulfide protein 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52773.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
small redox-active disulfide protein 2
L3_083_059G1_scaffold_166_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21129..22196
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52774.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phosphomannose isomerase
L3_083_059G1_scaffold_166_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22253..22507)
DNA (255bp) protein (85aa)
Heavy metal-associated domain protein n=2 Tax=Clostridiales RepID=G9YV65_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERI65012.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Copper chaperone
L3_083_059G1_scaffold_166_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22591..23076)
DNA (486bp) protein (162aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Formate dehydrogenase subunit gamma family protein n=2 Tax=Clostridiales RepID=U2B008_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25919.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_059G1_scaffold_166_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23073..23300)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L3_083_059G1_scaffold_166_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23278..24180)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L3_083_059G1_scaffold_166_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24295..24579)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52778.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_166_28
unknown

Not on your lists

24800..24997
DNA (198bp) protein (66aa)

This feature has no annotations

L3_083_059G1_scaffold_166_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25029..25487
DNA (459bp) protein (153aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAW3_9CLOT
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:ERI62949.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative Xre family DNA-binding protein
L3_083_059G1_scaffold_166_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25565..25798)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AU77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25915.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 75 in total

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