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L3_083_059G1_scaffold_189

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_189_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..309)
DNA (309bp) protein (103aa)
Elongation factor Tu n=4 Tax=Enterobacteriaceae RepID=R8UVL9_9ENTR
tuf1; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L3_083_059G1_scaffold_189_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(380..2494)
DNA (2115bp) protein (705aa)
Elongation factor G n=1233 Tax=Enterobacteriaceae RepID=EFG_ECO24
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
fusA; translation elongation factor G
L3_083_059G1_scaffold_189_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2591..3061)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1793 Tax=Enterobacteriaceae RepID=RS7_ECOBW
rpsG; SSU ribosomal protein S7p (S5e)
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L3_083_059G1_scaffold_189_4
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3158..3532)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=3 Tax=Salmonella enterica I RepID=V5S6Y8_SALET
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1196830 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092.;"
L3_083_059G1_scaffold_189_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3658..3945)
DNA (288bp) protein (96aa)
Protein TusB n=524 Tax=Enterobacteriaceae RepID=TUSB_ECO24
sulfur transfer complex subunit TusB
Protein TusB {ECO:0000256|HAMAP-Rule:MF_01564, ECO:0000256|SAAS:SAAS00012082}; tRNA 2-thiouridine synthesizing protein B {ECO:0000256|HAMAP-Rule:MF_01564}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_083_059G1_scaffold_189_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3953..4312)
DNA (360bp) protein (120aa)
Protein TusC n=236 Tax=Enterobacteriaceae RepID=TUSC_ECO7I
tRNA 2-thiouridine synthesizing protein c
Protein TusC {ECO:0000256|HAMAP-Rule:MF_00389}; tRNA 2-thiouridine synthesizing protein C {ECO:0000256|HAMAP-Rule:MF_00389}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L3_083_059G1_scaffold_189_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4312..4698)
DNA (387bp) protein (129aa)
Sulfurtransferase TusD {ECO:0000256|HAMAP-Rule:MF_00390}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00390};; tRNA 2-thiouridine synthesizing protein D {ECO:0000256|HAMAP-Rule:MF_00390}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
tusD; tRNA 2-thiouridine synthesizin protein D (sulfurtransferase) (EC:2.8.1.-)
Sulfurtransferase TusD n=1 Tax=Escherichia coli KTE147 RepID=L4JHE9_ECOLX
L3_083_059G1_scaffold_189_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4698..5420)
DNA (723bp) protein (241aa)
Uncharacterized protein YheO n=1022 Tax=Enterobacteriaceae RepID=YHEO_ECOL6
sensory box protein
YheO-like protein {ECO:0000313|EMBL:EFK53412.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_083_059G1_scaffold_189_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5587..6399)
DNA (813bp) protein (271aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Escherichia coli KTE147 RepID=L4JG57_ECOLX
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase
L3_083_059G1_scaffold_189_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6620..6838
DNA (219bp) protein (73aa)
Protein SlyX n=78 Tax=Escherichia coli RepID=SLYX_ECOLU
slyX; hypothetical protein
Protein SlyX {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L3_083_059G1_scaffold_189_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6887..7477)
DNA (591bp) protein (197aa)
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD n=1355 Tax=Enterobacteriaceae RepID=SLYD_ECO57
L3_083_059G1_scaffold_189_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7572..7772)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 91 (4-4638751) RepID=T6MSN7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESE06566.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L3_083_059G1_scaffold_189_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7782..9587)
DNA (1806bp) protein (602aa)
Glutathione-regulated potassium-efflux system protein KefB n=74 Tax=Escherichia coli RepID=KEFB_ECOLU
kefB; glutathione-regulated potassium-efflux system protein KefB
Glutathione-regulated potassium-efflux system protein KefB {ECO:0000256|HAMAP-Rule:MF_01412}; K(+)/H(+) antiporter {ECO:0000256|HAMAP-Rule:MF_01412}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L3_083_059G1_scaffold_189_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9587..10138)
DNA (552bp) protein (184aa)
Glutathione-regulated potassium-efflux system ancillary protein KefG n=982 Tax=Enterobacteriaceae RepID=KEFG_ECO24
kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
Glutathione-regulated potassium-efflux system ancillary protein KefG {ECO:0000256|HAMAP-Rule:MF_01415, ECO:0000256|SAAS:SAAS00009823}; Putative quinone oxidoreductase KefG {ECO:0000256|HAMAP-Rule:MF_01415}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_083_059G1_scaffold_189_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10269..12182
DNA (1914bp) protein (638aa)
ABC transporter ATP-binding protein n=79 Tax=Escherichia coli RepID=D6IV99_ECOLX
Fused putative transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CAR14961.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
yheS; putative ABC transporter ATP-binding protein
L3_083_059G1_scaffold_189_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12182..13204
DNA (1023bp) protein (341aa)
Hydrolase n=4 Tax=Escherichia coli RepID=L3PYR0_ECOLX
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:KEL70202.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
putative hydrolase
L3_083_059G1_scaffold_189_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13198..13416
DNA (219bp) protein (73aa)
UPF0270 protein YheU n=1328 Tax=Enterobacteriaceae RepID=YHEU_ECO24
hypothetical protein
UPF0270 protein YheU {ECO:0000256|HAMAP-Rule:MF_00690}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L3_083_059G1_scaffold_189_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13470..14339
DNA (870bp) protein (290aa)
prkB; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
Phosphoribulokinase n=19 Tax=Escherichia coli RepID=D3GZH4_ECO44
L3_083_059G1_scaffold_189_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14394..14798)
DNA (405bp) protein (135aa)
Protein YhfA n=1350 Tax=Bacteria RepID=YHFA_ECO57
hypothetical protein
OsmC family protein {ECO:0000313|EMBL:ACD10286.1}; TaxID=344609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii serotype 18 (strain CDC 3083-94 / BS512).;"
L3_083_059G1_scaffold_189_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15103..15735
DNA (633bp) protein (211aa)
cAMP-activated global transcriptional regulator CRP n=1397 Tax=Enterobacteriaceae RepID=CRP_ECO57
crp; cAMP-regulatory protein
Transcriptional regulator {ECO:0000313|EMBL:ETE13957.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_083_059G1_scaffold_189_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15786..17876
DNA (2091bp) protein (697aa)
Uncharacterized protein YhfK n=654 Tax=Enterobacteriaceae RepID=YHFK_ECOLI
YccS/YhfK family integral membrane protein
YccS/YhfK family integral membrane protein {ECO:0000313|EMBL:EOW14859.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
L3_083_059G1_scaffold_189_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17941..19161)
DNA (1221bp) protein (407aa)
Acetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; Short=DapATase {ECO:0000256|HAMAP-Rule:MF_01107};; Short=Succinyldiaminopimelate transferase {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.17 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (EC:2.6.1.11 2.6.1.17)
Acetylornithine/succinyldiaminopimelate aminotransferase n=1 Tax=Escherichia coli KTE147 RepID=L4JHG0_ECOLX
L3_083_059G1_scaffold_189_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19247..19810)
DNA (564bp) protein (188aa)
para-aminobenzoate synthase component II (EC:2.6.1.85)
Para-aminobenzoate synthase glutamine amidotransferase component II n=20 Tax=Escherichia coli RepID=D7ZAL0_ECOLX
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ESD80623.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_083_059G1_scaffold_189_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19842..20444)
DNA (603bp) protein (201aa)
Stationary-phase protein, cell division n=1 Tax=Escherichia coli KTE147 RepID=L4JG70_ECOLX
Putative adenosine monophosphate-protein transferase fic {ECO:0000313|EMBL:KEL70194.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
fic; cell filamentation protein Fic
L3_083_059G1_scaffold_189_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20434..20601)
DNA (168bp) protein (56aa)
Uncharacterized protein n=228 Tax=Enterobacteriaceae RepID=J7R6P3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW11937.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_083_059G1_scaffold_189_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20706..21278)
DNA (573bp) protein (191aa)
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Peptidyl-prolyl cis-trans isomerase A n=1221 Tax=Enterobacteriaceae RepID=PPIA_ECO57
L3_083_059G1_scaffold_189_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21549..22718
DNA (1170bp) protein (390aa)
Protein TsgA n=1 Tax=Escherichia coli KTE147 RepID=L4JHG6_ECOLX
Protein TsgA {ECO:0000256|HAMAP-Rule:MF_01044}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
hypothetical protein
L3_083_059G1_scaffold_189_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22999..25542
DNA (2544bp) protein (848aa)
nirB; nitrite reductase [NAD(P)H], large subunit (EC:1.7.1.4)
Nitrite reductase (NAD(P)H) subunit n=887 Tax=Enterobacteriaceae RepID=C3SQF7_ECOLX
Nitrite reductase [NAD(P)H] large subunit {ECO:0000313|EMBL:EOW93306.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_083_059G1_scaffold_189_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25539..25865
DNA (327bp) protein (109aa)
Nitrite reductase (NADH) small subunit n=841 Tax=Enterobacteriaceae RepID=NIRD_ECO57
nirD; nitrite reductase [NAD(P)H], small subunit NirD
Nitrite reductase [NAD(P)H] small subunit {ECO:0000313|EMBL:ELI21669.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_083_059G1_scaffold_189_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25991..26797
DNA (807bp) protein (269aa)
Nitrite transporter NirC n=24 Tax=Enterobacteriaceae RepID=B3X5I3_SHIDY
nirC; Nitrite transporter NirC
Putative uncharacterized protein {ECO:0000313|EMBL:EFF10929.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
Displaying items 1-30 of 69 in total

View Taxonomy