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L3_083_059G1_scaffold_224

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_224_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..741
DNA (741bp) protein (247aa)
carboxy-terminal protease (EC:3.4.21.102)
Carboxy-terminal protease for penicillin-binding protein 3 n=109 Tax=Escherichia coli RepID=B7NBH8_ECOLU
Peptidase, S41 family {ECO:0000313|EMBL:ESD90639.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_083_059G1_scaffold_224_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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933..1814
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Protease HtpX n=1252 Tax=Enterobacteriaceae RepID=HTPX_ECO24
heat shock protein HtpX
L3_083_059G1_scaffold_224_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1860..3233)
DNA (1374bp) protein (458aa)
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=3 Tax=Escherichia coli RepID=L3P3H7_ECOLX
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KEJ76569.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
putative transport protein
L3_083_059G1_scaffold_224_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3410..4201
DNA (792bp) protein (264aa)
DNA-binding transcriptional repressor KdgR n=94 Tax=Escherichia coli RepID=B7NBH5_ECOLU
kdgR; DNA-binding transcriptional repressor KdgR
Putative uncharacterized protein {ECO:0000313|EMBL:EFF13089.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_083_059G1_scaffold_224_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4345..4584)
DNA (240bp) protein (80aa)
Uncharacterized protein YobH n=1056 Tax=Enterobacteriaceae RepID=YOBH_ECOL5
hypothetical protein
YobH-like family protein {ECO:0000313|EMBL:KEO33808.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L3_083_059G1_scaffold_224_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4961..5248
DNA (288bp) protein (96aa)
Uncharacterized protein n=74 Tax=Escherichia coli RepID=B1LD48_ECOSM
yebO; hypothetical protein
Uncharacterized protein yebO {ECO:0000313|EMBL:EFR16390.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L3_083_059G1_scaffold_224_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6074..6283
DNA (210bp) protein (70aa)
Cold shock-like protein CspC n=2241 Tax=Bacteria RepID=CSPC_ECO57
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFK12929.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L3_083_059G1_scaffold_224_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..7258
DNA (810bp) protein (270aa)
rrmA; 23S rRNA methyltransferase A (EC:2.1.1.51)
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:KEL70840.1}; EC=2.1.1.187 {ECO:0000313|EMBL:KEL70840.1};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
23S rRNA m1G745 methyltransferase n=92 Tax=Escherichia coli RepID=B7NBG9_ECOLU
L3_083_059G1_scaffold_224_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7255..7821)
DNA (567bp) protein (189aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=U9XWJ1_ECOLX
hypothetical protein
Probable manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_083_059G1_scaffold_224_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8250..8708)
DNA (459bp) protein (153aa)
Uncharacterized protein (Fragment) n=2 Tax=Escherichia coli RepID=D8AAU3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK73590.1}; Flags: Fragment;; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_083_059G1_scaffold_224_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8763..9614)
DNA (852bp) protein (284aa)
Mannose permease IID component n=1286 Tax=Enterobacteriaceae RepID=PTND_ECO57
PTS system mannose/fructose/sorbose family transporter subunit IID
Mannose permease IID component {ECO:0000313|EMBL:EFK19716.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_083_059G1_scaffold_224_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9627..10427)
DNA (801bp) protein (267aa)
Mannose permease IIC component n=1377 Tax=Enterobacteriaceae RepID=PTNC_ECO57
PTS system mannose/fructose/sorbose family transporter subunit IIC
Mannose permease IIC component {ECO:0000313|EMBL:EOV76374.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_083_059G1_scaffold_224_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10490..11461)
DNA (972bp) protein (324aa)
PTS system mannose-specific EIIAB component n=8 Tax=Escherichia coli RepID=F4V2W9_ECOLX
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:EGI50731.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
manX; putative PTS system, mannose-specific component
L3_083_059G1_scaffold_224_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11727..11936
DNA (210bp) protein (70aa)
Uncharacterized protein n=165 Tax=Escherichia coli RepID=B7USJ2_ECO27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI27470.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_083_059G1_scaffold_224_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11924..13480
DNA (1557bp) protein (519aa)
UPF0053 inner membrane protein YoaE n=1151 Tax=Enterobacteriaceae RepID=YOAE_ECO57
integral membrane protein TerC
Putative transporter {ECO:0000313|EMBL:EHU46368.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_083_059G1_scaffold_224_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13484..15082)
DNA (1599bp) protein (533aa)
Phosphodiesterase n=1 Tax=Escherichia coli KTE147 RepID=L4JMD3_ECOLX
YoaD protein {ECO:0000313|EMBL:EFF05756.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
adrB; cyclic di-GMP phosphodiesterase
L3_083_059G1_scaffold_224_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15213..16577)
DNA (1365bp) protein (455aa)
L-serine dehydratase 1 (EC:4.3.1.17)
L-serine dehydratase 1 n=14 Tax=Escherichia coli RepID=L2XPK2_ECOLX
L-serine dehydratase 1 {ECO:0000313|EMBL:EQN98566.1}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
L3_083_059G1_scaffold_224_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16761..17339)
DNA (579bp) protein (193aa)
Uncharacterized Nudix hydrolase NudL {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00010716}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00280366};; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
Uncharacterized Nudix hydrolase NudL n=1 Tax=Escherichia coli KTE147 RepID=L4JM39_ECOLX
NUDIX hydrolase
L3_083_059G1_scaffold_224_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17343..18704)
DNA (1362bp) protein (454aa)
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:KEJ76551.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KEJ76551.1};; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
Para-aminobenzoate synthase component 1 n=1 Tax=Escherichia coli KTE147 PF0_ECOLX">RepID=L4JPF0_ECOLX
pabB; aminodeoxychorismate synthase subunit I
L3_083_059G1_scaffold_224_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18778..18957
DNA (180bp) protein (60aa)
UPF0181 protein YoaH n=1394 Tax=Enterobacteriaceae RepID=YOAH_ECO24
hypothetical protein
UPF0181 protein YoaH {ECO:0000256|HAMAP-Rule:MF_00507}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_083_059G1_scaffold_224_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19077..19376)
DNA (300bp) protein (100aa)
Uncharacterized protein n=142 Tax=Escherichia coli RepID=B7NBF6_ECOLU
yoaC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU67468.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_083_059G1_scaffold_224_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19798..20145)
DNA (348bp) protein (116aa)
Uncharacterized protein n=23 Tax=Enterobacteriaceae RepID=C3T6H2_ECOLX
yoaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK47039.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L3_083_059G1_scaffold_224_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20274..22184
DNA (1911bp) protein (637aa)
Nucleoside triphosphate hydrolase n=19 Tax=Escherichia coli RepID=L3J712_ECOLX
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:ELE60249.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
hypothetical protein
L3_083_059G1_scaffold_224_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22242..22937
DNA (696bp) protein (232aa)
Universal bacterial protein YeaZ n=1 Tax=Escherichia coli KTE147 RepID=L4JPE4_ECOLX
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:KEL70855.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
glycoprotease
L3_083_059G1_scaffold_224_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22976..23557
DNA (582bp) protein (194aa)
Uncharacterized lipoprotein YeaY n=784 Tax=Enterobacteriaceae RepID=YEAY_ECOL6
yeaY; putative outer membrane protein
Outer membrane lipo, Slp family protein {ECO:0000313|EMBL:EMX40120.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_083_059G1_scaffold_224_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23696..25447
DNA (1752bp) protein (584aa)
Long-chain-fatty-acid-CoA ligase n=2 Tax=Escherichia coli RepID=L4JMC3_ECOLX
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:EHP65438.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
long-chain-fatty-acid--CoA ligase
L3_083_059G1_scaffold_224_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25529..26644
DNA (1116bp) protein (372aa)
rnd; ribonuclease D (EC:3.1.26.3)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
ribonuclease D n=1 Tax=Escherichia coli RepID=UPI0002B9C8B1
L3_083_059G1_scaffold_224_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26691..27656)
DNA (966bp) protein (322aa)
Oxidoreductase n=1 Tax=Escherichia coli KTE147 RepID=L4JM31_ECOLX
Oxidoreductase {ECO:0000313|EMBL:ESK36059.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
putative oxidoreductase
L3_083_059G1_scaffold_224_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27712..28836)
DNA (1125bp) protein (375aa)
2Fe-2S cluster-containing protein n=5 Tax=Escherichia coli RepID=L4JPE1_ECOLX
Dioxygenase {ECO:0000313|EMBL:KJH05254.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
L3_083_059G1_scaffold_224_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28868..30478)
DNA (1611bp) protein (537aa)
Betaine/carnitine/choline transporter (BCCT) family transporter n=4 Tax=Escherichia coli RepID=L3YAZ7_ECOLX
Betaine/carnitine/choline transporter (BCCT) family transporter {ECO:0000313|EMBL:ELG88909.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
BCCT-family transporter
Displaying items 1-30 of 61 in total

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