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L3_083_059G1_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_228_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..2849
DNA (2847bp) protein (949aa)
Outer membrane protein n=7 Tax=Bacteroidales RepID=D7IWD8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS65461.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_083_059G1_scaffold_228_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2870..4240
DNA (1371bp) protein (457aa)
SusD family protein n=5 Tax=Bacteroidales RepID=C7XA45_9PORP
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS65460.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_228_3
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4318..5775)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A7A3_9PORP
Molybdate transport system ATP-binding component {ECO:0000313|EMBL:CDB48623.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
molybdenum transport ATP-binding protein
L3_083_059G1_scaffold_228_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5927..7414)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9A3_PARD8
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS65459.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_083_059G1_scaffold_228_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7440..10685)
DNA (3246bp) protein (1082aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=D7IWD4_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI07251.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_059G1_scaffold_228_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11247..11915
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6AJH1_9PORP
secreted glycosylhydrolase
Putative secreted glycosylhydrolase {ECO:0000313|EMBL:ABR42265.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_059G1_scaffold_228_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11967..12734)
DNA (768bp) protein (256aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Acetylglutamate kinase n=9 Tax=Bacteroidales RepID=ARGB_PARD8
acetylglutamate kinase
L3_083_059G1_scaffold_228_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13182..14435
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWD1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07248.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_059G1_scaffold_228_9
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14432..16018
DNA (1587bp) protein (529aa)
Alkaline phosphatase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87670.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
alkaline phosphatase
L3_083_059G1_scaffold_228_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16151..19531
DNA (3381bp) protein (1127aa)
Protein translocase subunit SecA n=8 Tax=Bacteroidales RepID=SECA_PARD8
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
secA; preprotein translocase subunit SecA
L3_083_059G1_scaffold_228_11
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19628..20647
DNA (1020bp) protein (340aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
Alanine dehydrogenase 2 (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VRC2_BACFG
L3_083_059G1_scaffold_228_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20803..21546
DNA (744bp) protein (248aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6L995_PARD8
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:KDS67348.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_228_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21638..22966)
DNA (1329bp) protein (443aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Membrane-associated zinc metalloprotease n=4 Tax=Bacteroidales RepID=A6L994_PARD8
membrane-associated zinc metalloprotease
L3_083_059G1_scaffold_228_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22997..24148)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Bacteroidales RepID=A6L993_PARD8
L3_083_059G1_scaffold_228_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24155..25018)
DNA (864bp) protein (288aa)
Peptidase, M23 family n=3 Tax=Bacteroidales RepID=C7XA32_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EEU51109.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
membrane peptidase
L3_083_059G1_scaffold_228_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25047..25568)
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=4 Tax=Bacteroidales RepID=RIMM_PARD8
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_228_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25581..26885)
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Bacteroidales RepID=A6L990_PARD8
L3_083_059G1_scaffold_228_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26882..27487)
DNA (606bp) protein (202aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L989_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51106.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_059G1_scaffold_228_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27554..28051)
DNA (498bp) protein (166aa)
Phosphinothricin N-acetyltransferase, putative n=2 Tax=Parabacteroides RepID=A6L988_PARD8
phosphinothricin N-acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:KDS67340.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_228_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28147..29961)
DNA (1815bp) protein (605aa)
Glycosyl hydrolase, family 2 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWB9_9BACE
Glycosyl hydrolase, family 2 {ECO:0000313|EMBL:EFI07236.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
beta-glycosidase
L3_083_059G1_scaffold_228_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30843..32360)
DNA (1518bp) protein (506aa)
TonB-dependent receptor exported protein n=3 Tax=Bacteroidales RepID=D7IWB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87657.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent receptor
L3_083_059G1_scaffold_228_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32315..33250)
DNA (936bp) protein (312aa)
TonB-dependent receptor exported protein n=3 Tax=Bacteroidales RepID=D7IWB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87657.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent receptor
L3_083_059G1_scaffold_228_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33428..34534
DNA (1107bp) protein (369aa)
Two-component system sensor protein histidine kinase n=3 Tax=Bacteroidales RepID=D7IWB6_9BACE
Two-component system sensor protein histidine kinase {ECO:0000313|EMBL:EFI07233.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component system sensor protein histidine kinase
L3_083_059G1_scaffold_228_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34552..35304
DNA (753bp) protein (251aa)
Two-component system response regulator n=3 Tax=Bacteroidales RepID=D7IWB5_9BACE
Two-component system response regulator {ECO:0000313|EMBL:EFI07232.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component response regulator
L3_083_059G1_scaffold_228_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35378..36229
DNA (852bp) protein (284aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6L983_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61425.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_059G1_scaffold_228_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36280..36942
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Parabacteroides sp. D13 RepID=C7XA23_9PORP
gidB; 16S rRNA methyltransferase GidB
L3_083_059G1_scaffold_228_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36939..37577
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AG59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26999.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
metallo-beta-lactamase
L3_083_059G1_scaffold_228_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37590..40442
DNA (2853bp) protein (951aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase n=1 Tax=Parabacteroides sp. D25 RepID=K6BG03_9PORP
L3_083_059G1_scaffold_228_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40424..41548
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A782_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87650.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_228_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41661..43040
DNA (1380bp) protein (460aa)
Transporter, major facilitator family protein n=5 Tax=Parabacteroides RepID=C7XA19_9PORP
permease
Uncharacterized protein {ECO:0000313|EMBL:EKN26996.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Displaying items 1-30 of 234 in total

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