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L3_083_059G1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_253_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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354..701
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
mRNA interferase n=3 Tax=Clostridium RepID=E7GTD0_CLOSY
transcriptional modulator of MazE/toxin MazF
L3_083_059G1_scaffold_253_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

895..2256
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06902.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Hemolysins and related proteins containing CBS domains
L3_083_059G1_scaffold_253_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2365..3750
DNA (1386bp) protein (462aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=U2D995_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06901.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
mate efflux family protein
L3_083_059G1_scaffold_253_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3813..4451
DNA (639bp) protein (213aa)
Galactoside O-acetyltransferase (EC:2.3.1.18)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STK9_CLOSY
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:ERI76082.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_059G1_scaffold_253_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4571..6292)
DNA (1722bp) protein (574aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Clostridium symbiosum RepID=E7GTD4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92011.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_253_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6460..7845)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9STL1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06898.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_059G1_scaffold_253_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8236..8964
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein HMPREF9474_04181 n=4 Tax=Clostridium RepID=E7GTD6_CLOSY
Probable transcriptional regulatory protein HMPREF9474_04181 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
conserved hypothetical protein TIGR01033
L3_083_059G1_scaffold_253_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9449..10876
DNA (1428bp) protein (476aa)
Transporter, SSS family n=3 Tax=Clostridium symbiosum RepID=E9STL3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92014.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
osmoregulated proline transporter
L3_083_059G1_scaffold_253_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11247..11453
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STL4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92015.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_253_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11538..12998)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=4 Tax=Clostridium RepID=U2BV17_CLOSY
L3_083_059G1_scaffold_253_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13188..13292
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06893.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_253_12
unknown

Not on your lists

13319..13468
DNA (150bp) protein (50aa)

This feature has no annotations

L3_083_059G1_scaffold_253_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13674..16814
DNA (3141bp) protein (1047aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Clostridium RepID=E7GTE1_CLOSY
L3_083_059G1_scaffold_253_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16830..19283
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9K9_9CLOT
L3_083_059G1_scaffold_253_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19284..19820
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9STL8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91924.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_253_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19943..20857
DNA (915bp) protein (305aa)
Stage II sporulation protein D n=4 Tax=Clostridium RepID=E7GTE4_CLOSY
Stage II sporulation protein D {ECO:0000313|EMBL:EGA91925.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
SpoIID/LytB domain-containing protein
L3_083_059G1_scaffold_253_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20898..21671
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GTE5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91926.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptidase M23
L3_083_059G1_scaffold_253_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21893..22486
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9STM1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06887.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Uncharacterised ACR, YkgG family COG1556.
L3_083_059G1_scaffold_253_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22624..23046
DNA (423bp) protein (141aa)
CBS domain protein n=4 Tax=Clostridium RepID=E9STM2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06886.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_059G1_scaffold_253_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23304..23828
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STM3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91929.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_253_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23829..24083
DNA (255bp) protein (85aa)
Spore coat peptide assembly protein cotJB n=4 Tax=Clostridium RepID=E7GTE9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06884.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_059G1_scaffold_253_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24087..24533
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STM5_CLOSY
CotJC protein {ECO:0000313|EMBL:ERI76103.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Mn-containing catalase
L3_083_059G1_scaffold_253_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24579..26147)
DNA (1569bp) protein (523aa)
Resolvase, N-terminal domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPJ0_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM88786.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_083_059G1_scaffold_253_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26229..26372)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88785.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_083_059G1_scaffold_253_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26874..27113)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88784.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
conjugative transposon protein
L3_083_059G1_scaffold_253_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27110..27529)
DNA (420bp) protein (140aa)
Sigma-70, region 4 n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI7_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDM88783.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_083_059G1_scaffold_253_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28124..28477
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI5_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM88781.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
HTH-type transcriptional regulator
L3_083_059G1_scaffold_253_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28491..28661)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88780.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_083_059G1_scaffold_253_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28658..29299)
DNA (642bp) protein (214aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM88779.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_083_059G1_scaffold_253_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29310..30707)
DNA (1398bp) protein (466aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI2_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM88778.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ABC-type transport system, involved in lipoprotein release, permease component
Displaying items 1-30 of 60 in total

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