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L3_083_059G1_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_291_1
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N2Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86026.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
CBS/transporter associated domain-containing protein
L3_083_059G1_scaffold_291_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(715..2067)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glmM; phosphoglucosamine mutase GlmM (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=B1QZX1_CLOBU
L3_083_059G1_scaffold_291_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..2538)
DNA (306bp) protein (102aa)
TrpR homolog, YerC/YecD family n=3 Tax=Clostridium butyricum RepID=C4IEZ0_CLOBU
TrpR homolog, YerC/YecD family {ECO:0000313|EMBL:EEP55581.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TrpR like protein, YerC/YecD
L3_083_059G1_scaffold_291_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2806..4293
DNA (1488bp) protein (496aa)
Membrane-bound O-acyltransferase family protein n=2 Tax=Clostridium botulinum A RepID=A5I6C7_CLOBH
Putative alginate O-acetyltransferase AlgI {ECO:0000313|EMBL:BAQ14715.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
alginate O-acetyltransferase AlgI
L3_083_059G1_scaffold_291_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4308..5267
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1IM48_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ14716.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_083_059G1_scaffold_291_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5461..6486)
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=4 Tax=Clostridium butyricum RepID=B1QZW2_CLOBU
L3_083_059G1_scaffold_291_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6803..7636)
DNA (834bp) protein (278aa)
HTH DNA-binding protein n=3 Tax=Clostridium butyricum RepID=B1QZW9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97387.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
HTH DNA-binding protein
L3_083_059G1_scaffold_291_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7841..8908)
DNA (1068bp) protein (356aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
buk1; butyrate kinase Buk (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Clostridium butyricum RepID=B1QZW1_CLOBU
L3_083_059G1_scaffold_291_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9006..9914)
DNA (909bp) protein (303aa)
Phosphotransbutyrylase {ECO:0000313|EMBL:KJZ87175.1}; EC=2.3.1.19 {ECO:0000313|EMBL:KJZ87175.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ptb; phosphate butyryltransferase Ptb (EC:2.3.1.19)
Phosphate butyryltransferase n=2 Tax=Clostridium butyricum RepID=M8K9M7_CLOBU
L3_083_059G1_scaffold_291_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10247..11611)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003754432
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EKY28742.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_083_059G1_scaffold_291_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11863..12717)
DNA (855bp) protein (285aa)
Tagatose 1,6-bisphosphate aldolase {ECO:0000313|EMBL:KJZ88013.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KJZ88013.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=2 Tax=Clostridium butyricum RepID=B1QXV0_CLOBU
L3_083_059G1_scaffold_291_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12762..13193)
DNA (432bp) protein (144aa)
Pts system mannose-specific eiiab component n=3 Tax=Clostridium butyricum RepID=B1QXU9_CLOBU
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ30325.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system fructose IIA component
L3_083_059G1_scaffold_291_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13212..14372)
DNA (1161bp) protein (387aa)
Putative tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30324.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AgaS protein
L3_083_059G1_scaffold_291_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14488..15234)
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium butyricum RepID=M8K263_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
L3_083_059G1_scaffold_291_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15368..16213)
DNA (846bp) protein (282aa)
N-acetylgalactosamine permease iid component n=2 Tax=Clostridium butyricum RepID=B1QXU6_CLOBU
N-acetylgalactosamine permease iid component {ECO:0000313|EMBL:EEP55140.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_083_059G1_scaffold_291_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16203..16973)
DNA (771bp) protein (257aa)
N-acetylgalactosamine permease iic component 1 n=2 Tax=Clostridium butyricum RepID=B1QXU5_CLOBU
PTS system sorbose-specific IIC component {ECO:0000313|EMBL:EEP55384.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system sorbose-specific transporter subunit IIC
L3_083_059G1_scaffold_291_17
Clostridium sp. IBUN62F, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17003..17479)
DNA (477bp) protein (159aa)
PTS system, hyaluronate-oligosaccharide-specific IIB component {ECO:0000313|EMBL:KJZ93520.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ93520.1};; TaxID=1523157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN62F.;"
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Clostridium butyricum RepID=M8J6M0_CLOBU
L3_083_059G1_scaffold_291_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17795..18934
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE8_CLOBU
L3_083_059G1_scaffold_291_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18970..19926)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1G5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30318.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BadF/BadG/BcrA/BcrD family ATPase
L3_083_059G1_scaffold_291_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19984..21330)
DNA (1347bp) protein (449aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8JFI5_CLOBU
Sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:KJZ88010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L3_083_059G1_scaffold_291_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21417..21572)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88021.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_083_059G1_scaffold_291_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21598..23757)
DNA (2160bp) protein (720aa)
Lacto-N-biose phosphorylase {ECO:0000313|EMBL:KJZ88009.1}; EC=2.4.1.211 {ECO:0000313|EMBL:KJZ88009.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGU8_CLOBU
hypothetical protein
L3_083_059G1_scaffold_291_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23769..24656)
DNA (888bp) protein (296aa)
Permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT9_CLOBU
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KJZ88020.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport system inner membrane protein
L3_083_059G1_scaffold_291_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24669..25556)
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT8_CLOBU
ABC transporter, permease protein {ECO:0000313|EMBL:EEP55326.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport system inner membrane protein
L3_083_059G1_scaffold_291_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25752..26615
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=4 Tax=Clostridium butyricum RepID=B1QXT7_CLOBU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEP55259.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
AraC family transcriptional regulator
L3_083_059G1_scaffold_291_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26678..28285)
DNA (1608bp) protein (536aa)
FAD-dependent dehydrogenase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML99_CLOSA
FAD-dependent dehydrogenase
FAD-dependent dehydrogenase {ECO:0000313|EMBL:AGX41308.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_059G1_scaffold_291_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28404..29621)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNP0_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41306.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_059G1_scaffold_291_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29594..30445)
DNA (852bp) protein (284aa)
TIGR00159 family protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T023_9CLOT
TIGR00159 family protein {ECO:0000313|EMBL:EKQ52183.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
TIGR00159 family protein
L3_083_059G1_scaffold_291_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30619..31602
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKG5_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41304.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_059G1_scaffold_291_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31664..32239
DNA (576bp) protein (192aa)
cell wall hydrolase (EC:3.5.1.28)
Cell wall hydrolase {ECO:0000313|EMBL:AGX41303.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AGX41303.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cell wall hydrolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML95_CLOSA
Displaying items 1-30 of 46 in total

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