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L3_083_059G1_scaffold_294

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_294_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(277..1746)
DNA (1470bp) protein (490aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRU1_CLOSY
MutT/nudix family Pyrophosphatase {ECO:0000313|EMBL:EGA92806.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
NUDIX domain.
L3_083_059G1_scaffold_294_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..2953)
DNA (1113bp) protein (371aa)
Putative sporulation integral membrane protein YtvI n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C9A6_CLOSY
Putative sporulation integral membrane protein YtvI {ECO:0000313|EMBL:ERI80593.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted permease
L3_083_059G1_scaffold_294_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3187..3480)
DNA (294bp) protein (98aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=2 Tax=Clostridium RepID=G5FCR3_9CLOT
Acylphosphatase {ECO:0000313|EMBL:EHF05857.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_294_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3461..4279)
DNA (819bp) protein (273aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Ribosomal large subunit pseudouridine synthase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQU9_CLOSY
Ribosomal large subunit pseudouridine synthase {ECO:0000313|EMBL:EGA92803.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_294_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4568..5218
DNA (651bp) protein (217aa)
Channel protein, hemolysin III family n=2 Tax=Clostridium RepID=U2DLN2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05859.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
channel protein, hemolysin III family
L3_083_059G1_scaffold_294_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5273..6955)
DNA (1683bp) protein (561aa)
Peptidase, S8/S53 family n=2 Tax=Clostridium symbiosum RepID=E9SRU6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92801.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L3_083_059G1_scaffold_294_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7140..7739
DNA (600bp) protein (200aa)
Chromate transporter n=4 Tax=Clostridium RepID=E7GQU6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05861.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chromate transporter
L3_083_059G1_scaffold_294_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7726..8301
DNA (576bp) protein (192aa)
Chromate transport protein n=3 Tax=Clostridium RepID=E9SRU8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05862.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chromate transporter
L3_083_059G1_scaffold_294_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8354..9232)
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=3 Tax=Clostridium RepID=E9SRU9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05863.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LysR family transcriptional regulator
L3_083_059G1_scaffold_294_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9251..10078)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05864.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
asparagine synthase
L3_083_059G1_scaffold_294_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10125..11417)
DNA (1293bp) protein (431aa)
UPF0272 protein HMPREF1020_02267 n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCS1_9CLOT
UPF0272 protein HMPREF1020_02267 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
conserved hypothetical protein TIGR00299
L3_083_059G1_scaffold_294_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11440..12198)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05866.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
NCAIR mutase (PurE)-related proteins
L3_083_059G1_scaffold_294_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12377..12991)
DNA (615bp) protein (205aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C7X4_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI80605.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter
L3_083_059G1_scaffold_294_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12988..13818)
DNA (831bp) protein (277aa)
Oligopeptide/dipeptide ABC transporter n=3 Tax=Clostridium RepID=E7GQT9_CLOSY
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:EGA92793.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_083_059G1_scaffold_294_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13863..14717)
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=U2DGL0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05869.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_083_059G1_scaffold_294_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14714..15730)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05870.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_083_059G1_scaffold_294_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15747..17393)
DNA (1647bp) protein (549aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridium RepID=E9SRV8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05871.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide transport system, periplasmic component
L3_083_059G1_scaffold_294_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17965..18909)
DNA (945bp) protein (315aa)
HDIG domain protein n=4 Tax=Clostridium RepID=E9SRV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05749.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
uncharacterized domain HDIG
L3_083_059G1_scaffold_294_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19129..20451)
DNA (1323bp) protein (441aa)
PDZ/DHR/GLGF domain protein n=3 Tax=Clostridium RepID=U2DGI3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05750.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_083_059G1_scaffold_294_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20817..21377)
DNA (561bp) protein (187aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Signal peptidase I n=3 Tax=Clostridium RepID=E9SRW1_CLOSY
signal peptidase I
L3_083_059G1_scaffold_294_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21638..21931
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C7U6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80580.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_059G1_scaffold_294_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21939..24341
DNA (2403bp) protein (801aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Endonuclease MutS2 n=2 Tax=Clostridium symbiosum RepID=E7GMS6_CLOSY
MutS2 family protein
L3_083_059G1_scaffold_294_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24422..25135
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SRW3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93895.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_083_059G1_scaffold_294_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25294..26505)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMS8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93896.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_294_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26541..27551)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05755.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_059G1_scaffold_294_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27832..29190)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRW6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05756.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_059G1_scaffold_294_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29265..29846)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SRW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05757.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_294_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29857..30675)
DNA (819bp) protein (273aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRW8_CLOSY
MerR family Transcriptional regulator {ECO:0000313|EMBL:EGA93900.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
MerR family transcriptional regulator
L3_083_059G1_scaffold_294_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30872..31174
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93901.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_294_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31174..31575
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SRX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80589.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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