ggKbase home page

L3_083_059G1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_301_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95112.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_083_059G1_scaffold_301_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(314..1069)
DNA (756bp) protein (252aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASU1_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFC95113.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
GntR family transcriptional regulator
L3_083_059G1_scaffold_301_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1414..2511)
DNA (1098bp) protein (366aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASU2_9CLOT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EFC95114.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_083_059G1_scaffold_301_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3132..4364)
DNA (1233bp) protein (411aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RNA-splicing ligase RtcB n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVZ5_9CLOT
hypothetical protein
L3_083_059G1_scaffold_301_5
unknown

Not on your lists

4577..4681
DNA (105bp) protein (35aa)

This feature has no annotations

L3_083_059G1_scaffold_301_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4678..6066
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U213_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63147.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_083_059G1_scaffold_301_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6056..7060
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5TBZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63148.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
WYL domain-containing protein-containing protein
L3_083_059G1_scaffold_301_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7290..8822)
DNA (1533bp) protein (511aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridium RepID=D3AMV5_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_083_059G1_scaffold_301_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8819..9496)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=D3AMV6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFC96839.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
winged helix family two component transcriptional regulator
L3_083_059G1_scaffold_301_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9658..10890)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XIE2_9CLOT
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCZ63151.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_083_059G1_scaffold_301_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10957..11610)
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMV9_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFC96842.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
TetR family transcriptional regulator
L3_083_059G1_scaffold_301_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11668..12510)
DNA (843bp) protein (281aa)
Putative HAD hydrolase, TIGR01457 family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMW0_9CLOT
Putative HAD hydrolase, TIGR01457 family {ECO:0000313|EMBL:EFC96843.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Predicted sugar phosphatases of the HAD superfamily
L3_083_059G1_scaffold_301_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12557..13273)
DNA (717bp) protein (239aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMW1_9CLOT
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EFC96844.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
glycerophosphoryl diester phosphodiesterase
L3_083_059G1_scaffold_301_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13276..14997)
DNA (1722bp) protein (574aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMW2_9CLOT
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFC96845.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
glycoside hydrolase
L3_083_059G1_scaffold_301_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15291..16121)
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3AMW4_9CLOT
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCZ63156.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L3_083_059G1_scaffold_301_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16134..17027)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMW5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC96848.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L3_083_059G1_scaffold_301_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17120..18469)
DNA (1350bp) protein (450aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=D3AMW6_9CLOT
Solute binding protein of ABC transporter system {ECO:0000313|EMBL:CCZ63158.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter substrate-binding protein
L3_083_059G1_scaffold_301_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18793..19764
DNA (972bp) protein (324aa)
Transcriptional regulator, ArsR family n=2 Tax=Clostridium RepID=D3AMW8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCZ63159.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ArsR family transcriptional regulator
L3_083_059G1_scaffold_301_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19842..20684)
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMW9_9CLOT
L3_083_059G1_scaffold_301_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20844..21428)
DNA (585bp) protein (195aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC96853.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
wrbA; flavoprotein
L3_083_059G1_scaffold_301_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21534..22916)
DNA (1383bp) protein (461aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U230_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CCZ63162.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_083_059G1_scaffold_301_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22976..24892)
DNA (1917bp) protein (639aa)
PTS system glucose subfamily IIA component n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TC06_9CLOT
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CCZ63163.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
PTS system, glucose subfamily, IIA component
L3_083_059G1_scaffold_301_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25086..25214)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TIL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63164.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_083_059G1_scaffold_301_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25211..26203)
DNA (993bp) protein (331aa)
Sugar-binding domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBX5_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:CCZ63165.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LacI family transcriptional regulator
L3_083_059G1_scaffold_301_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26250..26795)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TW14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63166.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
N-acetyltransferase GCN5
L3_083_059G1_scaffold_301_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26965..27720)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XJ58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95656.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_083_059G1_scaffold_301_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27737..28537)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VY67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95655.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ssuC2; putative aliphatic sulfonates transport permease protein SsuC
L3_083_059G1_scaffold_301_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28624..29253)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VYN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95654.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter, substrate-binding protein, aliphatic sulfonates family
L3_083_059G1_scaffold_301_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29323..29736)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VYN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95654.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_083_059G1_scaffold_301_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29790..30620)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XIA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95653.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
TIM-barrel fold metal-dependent hydrolase
Displaying items 1-30 of 44 in total

View Taxonomy