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L3_083_059G1_scaffold_305

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_305_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..96)
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FK95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03168.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_305_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

332..1255
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=4 Tax=Clostridium RepID=E7GKP1_CLOSY
L3_083_059G1_scaffold_305_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1249..1674
DNA (426bp) protein (142aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=3 Tax=Clostridium RepID=E9SMD4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04777.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_083_059G1_scaffold_305_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2207..3232)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKP3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94695.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
CAAX amino terminal protease family.
L3_083_059G1_scaffold_305_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3372..4175
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKP4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94696.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_305_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4242..5897)
DNA (1656bp) protein (552aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=3 Tax=Clostridium RepID=E9SMD7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04774.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_305_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5936..6730)
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Clostridium symbiosum RepID=E7GKP6_CLOSY
conserved hypothetical protein TIGR00486
L3_083_059G1_scaffold_305_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6708..7409)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKP7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94699.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted SAM-dependent methyltransferase
L3_083_059G1_scaffold_305_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7495..8613)
DNA (1119bp) protein (373aa)
RNA polymerase sigma factor SigA n=4 Tax=Clostridium RepID=E7GKP8_CLOSY
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
RNA polymerase, sigma 70 subunit, RpoD
L3_083_059G1_scaffold_305_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8653..10443)
DNA (1791bp) protein (597aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DNA primase (EC:2.7.7.-)
DNA primase n=3 Tax=Clostridium symbiosum RepID=U2C1M8_CLOSY
L3_083_059G1_scaffold_305_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10454..11461)
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=3 Tax=Clostridium RepID=G5FFM4_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_305_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11635..13344)
DNA (1710bp) protein (570aa)
Putative uncharacterized protein n=3 Tax=Clostridium RepID=E7GKQ1_CLOSY
Putative protease CspB {ECO:0000313|EMBL:ERI78418.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Subtilisin-like serine proteases
L3_083_059G1_scaffold_305_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13407..14324)
DNA (918bp) protein (306aa)
SufB/sufD domain protein n=4 Tax=Clostridium RepID=E9SME4_CLOSY
SufB/sufD domain protein {ECO:0000313|EMBL:ERI78417.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L3_083_059G1_scaffold_305_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14324..15058)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=4 Tax=Clostridium RepID=E7GKQ3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94705.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
L3_083_059G1_scaffold_305_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15357..18161
DNA (2805bp) protein (935aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKQ4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94706.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
regulatory protein
L3_083_059G1_scaffold_305_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18190..18450)
DNA (261bp) protein (87aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SME7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78414.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_059G1_scaffold_305_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18461..20083)
DNA (1623bp) protein (541aa)
BCCT family Osmoprotectant transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKQ6_CLOSY
BCCT family Osmoprotectant transporter {ECO:0000313|EMBL:EGA94708.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_305_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20097..21599)
DNA (1503bp) protein (501aa)
Phenylalanine and histidine ammonia-lyase n=3 Tax=Clostridium symbiosum RepID=E7GKQ7_CLOSY
Phenylalanine and histidine ammonia-lyase {ECO:0000313|EMBL:EGA94709.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phenylalanine and histidine ammonia-lyase
L3_083_059G1_scaffold_305_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21600..23834)
DNA (2235bp) protein (745aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKQ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94710.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
L3_083_059G1_scaffold_305_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23827..24690)
DNA (864bp) protein (288aa)
purine hydroxlyse subunit gamma (EC:1.17.1.-)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04760.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_059G1_scaffold_305_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24687..25151)
DNA (465bp) protein (155aa)
ndhS1; nicotinate dehydrogenase small FeS subunit (EC:1.17.1.5)
2Fe-2S iron-sulfur cluster-binding domain protein n=4 Tax=Clostridium RepID=E9SMF2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94712.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_059G1_scaffold_305_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25609..26220
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94713.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized MobA-related protein
L3_083_059G1_scaffold_305_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26225..27160
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=3 Tax=Clostridium RepID=E9SMF4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94714.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
LysR family transcriptional regulator
L3_083_059G1_scaffold_305_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27157..28281
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94715.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L3_083_059G1_scaffold_305_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28278..29312
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94716.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Molybdopterin biosynthesis enzyme
L3_083_059G1_scaffold_305_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29315..29794
DNA (480bp) protein (160aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR5_CLOSY
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
molybdenum cofactor biosynthesis protein C
L3_083_059G1_scaffold_305_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29769..30743
DNA (975bp) protein (325aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR6_CLOSY
hypothetical protein
L3_083_059G1_scaffold_305_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30747..31679
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94719.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
molybdenum cofactor synthesis domain
L3_083_059G1_scaffold_305_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31667..32530
DNA (864bp) protein (288aa)
Molybdenum ABC transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKR8_CLOSY
Molybdenum ABC transporter {ECO:0000313|EMBL:EGA94720.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_083_059G1_scaffold_305_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32576..33241
DNA (666bp) protein (222aa)
Molybdate ABC transporter n=2 Tax=Clostridium RepID=E7GKR9_CLOSY
Molybdate ABC transporter {ECO:0000313|EMBL:EGA94721.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
modB; molybdate ABC transporter permease
Displaying items 1-30 of 72 in total

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