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L3_083_059G1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_315_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..397
DNA (396bp) protein (132aa)
tkt2; transketolase Tkt (EC:2.2.1.1)
Transketolase (Fragment) n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FT09_CLOPA
Transketolase {ECO:0000313|EMBL:ETD66537.1}; Flags: Fragment;; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_083_059G1_scaffold_315_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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587..1210
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUI3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44260.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_059G1_scaffold_315_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1327..2802
DNA (1476bp) protein (492aa)
L-fucose isomerase related protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F9_CLOB8
L-fucose isomerase-like protein
L-fucose isomerase related protein {ECO:0000313|EMBL:ABR36789.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_083_059G1_scaffold_315_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3167..5296
DNA (2130bp) protein (710aa)
Beta-glucosidase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G010_CLOPA
Beta-glucosidase {ECO:0000313|EMBL:ETD69002.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
glycoside hydrolase family 3 protein
L3_083_059G1_scaffold_315_5
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5550..7271
DNA (1722bp) protein (574aa)
lacZ3; beta-galactosidase LacZ (EC:3.2.1.23)
Beta-galactosidase LacZ {ECO:0000313|EMBL:AGC67981.1}; EC=3.2.1.23 {ECO:0000313|EMBL:AGC67981.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
glycoside hydrolase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288F1B9
L3_083_059G1_scaffold_315_6
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7219..7458
DNA (240bp) protein (80aa)
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ARC0_THEM3
glycoside hydrolase family 2 sugar binding protein
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:ADH60029.1}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
L3_083_059G1_scaffold_315_7
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7460..8005
DNA (546bp) protein (182aa)
glycoside hydrolase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288F1B9
Glycoside hydrolase family protein {ECO:0000313|EMBL:ETT33823.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
glycoside hydrolase family 2 sugar binding protein
L3_083_059G1_scaffold_315_8
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8273..8668
DNA (396bp) protein (132aa)
glycoside hydrolase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288F1B9
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AIQ37519.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
L3_083_059G1_scaffold_315_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8693..10312
DNA (1620bp) protein (540aa)
putative beta-xylosidase (EC:3.2.1.37)
Beta-xylosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TT89_9CLOT
Beta-xylosidase {ECO:0000313|EMBL:EKQ50481.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_083_059G1_scaffold_315_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10394..11785
DNA (1392bp) protein (464aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Uronate isomerase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUH3_CLOB8
glucuronate isomerase
L3_083_059G1_scaffold_315_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11804..12487
DNA (684bp) protein (228aa)
Response regulator receiver protein n=2 Tax=Clostridium RepID=A6LUH7_CLOB8
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Ketohydroxyglutarate aldolase {ECO:0000313|EMBL:ETD68783.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_083_059G1_scaffold_315_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12506..13456
DNA (951bp) protein (317aa)
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EHJ00135.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EHJ00135.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
kdgK; 2-dehydro-3-deoxygluconokinase KdgK (EC:2.7.1.45)
2-dehydro-3-deoxygluconokinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5M0_9CLOT
L3_083_059G1_scaffold_315_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13553..14239)
DNA (687bp) protein (229aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TI21_9CLOT
Putative integral membrane protein {ECO:0000313|EMBL:EKQ50895.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_083_059G1_scaffold_315_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14505..15296)
DNA (792bp) protein (264aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MVG4_9CLOT
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGF58626.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_083_059G1_scaffold_315_15
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15511..16578
DNA (1068bp) protein (356aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
uxuA2; mannonate dehydratase UxuA (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FVD9_CLOPA
L3_083_059G1_scaffold_315_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16688..18304
DNA (1617bp) protein (539aa)
MtlD n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VK05_CLOSH
Dioxygenase {ECO:0000313|EMBL:KJF26466.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
oxidoreductase
L3_083_059G1_scaffold_315_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18413..20500
DNA (2088bp) protein (696aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
aguA2; alpha-glucuronidase AguA (EC:3.2.1.139)
Alpha-glucuronidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U665_9CLOT
L3_083_059G1_scaffold_315_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20643..22313
DNA (1671bp) protein (557aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M203_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHI98636.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
extracellular solute-binding protein family 1
L3_083_059G1_scaffold_315_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22385..23344
DNA (960bp) protein (320aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M204_9CLOT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHI98637.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
L3_083_059G1_scaffold_315_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23359..24255
DNA (897bp) protein (299aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1ML06_9CLOT
carbohydrate ABC transporter membrane protein 2, CUT1 family
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGF58609.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_083_059G1_scaffold_315_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24255..25379
DNA (1125bp) protein (375aa)
endoglucanase Y (EC:3.2.1.156)
Endoglucanase Y n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TH81_9CLOT
Endoglucanase Y {ECO:0000313|EMBL:EKQ50485.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_083_059G1_scaffold_315_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25354..26940
DNA (1587bp) protein (529aa)
xylB4; xylosidase/arabinosidase XylB (EC:3.2.1.37 3.2.1.55)
Beta-xylosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U662_9CLOT
Beta-xylosidase {ECO:0000313|EMBL:EKQ50484.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_083_059G1_scaffold_315_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26983..29724
DNA (2742bp) protein (914aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Cellulose 1,4-beta-cellobiosidase (EC:3.2.1.91)
Beta-1,4-xylanase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWI9_9CLOT
L3_083_059G1_scaffold_315_24
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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29852..31732
DNA (1881bp) protein (627aa)
Putative uncharacterized protein id=3825258 bin=GWF2_Planctomycete_41_51 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=GWF2_Planctomycetes_41_51_curated
L3_083_059G1_scaffold_315_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31887..33665
DNA (1779bp) protein (593aa)
yesM2; sensor histidine kinase YesM (EC:2.7.13.3)
Putative sensor with HAMP domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1Z9_9CLOT
Putative sensor with HAMP domain containing protein {ECO:0000313|EMBL:EHI98632.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L3_083_059G1_scaffold_315_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33662..35251
DNA (1590bp) protein (530aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M200_9CLOT
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:EHI98633.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
response regulator
L3_083_059G1_scaffold_315_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35634..37679
DNA (2046bp) protein (682aa)
Methyl-accepting chemotaxis protein TlpB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MDH6_9CLOT
tlpB1; methyl-accepting chemotaxis protein TlpB
Methyl-accepting chemotaxis protein TlpB {ECO:0000313|EMBL:AGF54448.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_083_059G1_scaffold_315_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37898..39613
DNA (1716bp) protein (572aa)
Lysophospholipase L1-like esterase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAF4_9CLOT
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EKQ56863.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
GDSL-like lipase/acylhydrolase family
L3_083_059G1_scaffold_315_29
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39649..42507
DNA (2859bp) protein (953aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LZ95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AGF58615.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
hypothetical protein
L3_083_059G1_scaffold_315_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42810..43790
DNA (981bp) protein (327aa)
UPI0003D5CC4F related cluster n=1 Tax=unknown RepID=UPI0003D5CC4F
Cold-shock protein {ECO:0000313|EMBL:KHD16427.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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