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L3_083_059G1_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_340_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1118)
DNA (1116bp) protein (372aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAZ6_9CLOT
ATP-dependent peptidase
L3_083_059G1_scaffold_340_2

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1600..2196
DNA (597bp) protein (199aa)
Translation initiation factor IF-3 n=213 Tax=Clostridium difficile RepID=Q189N1_CLOD6
Translation initiation factor IF-3 {ECO:0000313|EMBL:ETJ16882.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
infC; translation initiation factor IF-3
L3_083_059G1_scaffold_340_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2237..2431
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=2 Tax=Clostridiales RepID=B0A8Z7_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
50S ribosomal protein L35
L3_083_059G1_scaffold_340_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2523..2879
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Clostridiales RepID=B0A8Z6_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rplT; 50S ribosomal protein L20
L3_083_059G1_scaffold_340_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3115..4491
DNA (1377bp) protein (459aa)
Potassium uptake protein, TrkH family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Z5_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDQ96896.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cation transport protein
L3_083_059G1_scaffold_340_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4514..5197
DNA (684bp) protein (228aa)
TrkA N-terminal domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB00_9CLOT
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDA09559.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
cation transport protein
L3_083_059G1_scaffold_340_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5218..6015
DNA (798bp) protein (266aa)
Putative RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Z3_9FIRM
Putative RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDQ96894.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
RNA methylase
L3_083_059G1_scaffold_340_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6402..7421
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
pheS; Phenylalanyl-tRNA synthetase alpha chain(Phenylalanine--tRNA ligase alpha chain) (PheRS) (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridiales RepID=B0A8Z2_9FIRM
L3_083_059G1_scaffold_340_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7550..9943
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Clostridiales RepID=B0A8Z1_9FIRM
pheT; phenylalanyl-tRNA synthetase subunit beta
L3_083_059G1_scaffold_340_10

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9972..10589
DNA (618bp) protein (206aa)
Cell division protein ZapA n=2 Tax=Clostridiales RepID=B0A8Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16874.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative cell-division protein
L3_083_059G1_scaffold_340_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10793..12112
DNA (1320bp) protein (440aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y9_9FIRM
L3_083_059G1_scaffold_340_12

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12294..16499
DNA (4206bp) protein (1402aa)
Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI67_METAC
Uncharacterized protein {ECO:0000313|EMBL:ETJ16872.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_059G1_scaffold_340_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16771..19191
DNA (2421bp) protein (807aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDQ96889.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDQ96889.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Peptidase, U32 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y8_9FIRM
protease
L3_083_059G1_scaffold_340_14

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19215..19655
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16870.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_083_059G1_scaffold_340_15

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19880..23068
DNA (3189bp) protein (1063aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sensor histidine kinase/response regulator
L3_083_059G1_scaffold_340_16

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comp(23131..23328)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_059G1_scaffold_340_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23759..25384
DNA (1626bp) protein (542aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EDQ96885.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EDQ96885.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
asD: bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase (EC:2.6.1.1 4.1.1.12)
Aspartate 4-decarboxylase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y4_9FIRM
L3_083_059G1_scaffold_340_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25522..25860)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96884.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_059G1_scaffold_340_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25853..27781)
DNA (1929bp) protein (643aa)
UPI0003D5E44B related cluster n=1 Tax=unknown RepID=UPI0003D5E44B
Uncharacterized protein {ECO:0000313|EMBL:ETI94549.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
oligopeptide transporter
L3_083_059G1_scaffold_340_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27823..29268)
DNA (1446bp) protein (482aa)
Xaa-His dipeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y1_9FIRM
Xaa-His dipeptidase {ECO:0000313|EMBL:EDQ96882.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
pepD; aminoacyl-histidine dipeptidase
L3_083_059G1_scaffold_340_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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29574..31334
DNA (1761bp) protein (587aa)
UPI0003D5CB20 related cluster n=1 Tax=unknown RepID=UPI0003D5CB20
Uncharacterized protein {ECO:0000313|EMBL:ETI94551.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter
L3_083_059G1_scaffold_340_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31531..33909
DNA (2379bp) protein (793aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Endonuclease MutS2 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB13_9CLOT
DNA mismatch repair protein
L3_083_059G1_scaffold_340_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33954..34406
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A8X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09575.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_340_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34513..36213
DNA (1701bp) protein (567aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLW6_9CLOT
L3_083_059G1_scaffold_340_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36343..37266
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A8X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09577.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
conserved hypothetical protein
L3_083_059G1_scaffold_340_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37263..37463)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A8X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09578.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
conserved hypothetical protein
L3_083_059G1_scaffold_340_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37567..39345
DNA (1779bp) protein (593aa)
UPI0003D5BF55 related cluster n=1 Tax=unknown RepID=UPI0003D5BF55
Uncharacterized protein {ECO:0000313|EMBL:ETI95814.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
adenosylcobamide-dependent radical SAM protein
L3_083_059G1_scaffold_340_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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39369..40511
DNA (1143bp) protein (381aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8X3_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDQ96874.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_059G1_scaffold_340_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41117..43084
DNA (1968bp) protein (656aa)
cooS; bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=2 Tax=Clostridiales RepID=B0A8X2_9FIRM
Carbon-monoxide dehydrogenase catalytic subunit {ECO:0000313|EMBL:CDA09581.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_059G1_scaffold_340_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43232..44026
DNA (795bp) protein (265aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Clostridiales RepID=B0A8X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95810.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
cooC; carbon monoxide dehydrogenase accessory protein
Displaying items 1-30 of 31 in total

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