ggKbase home page

L3_083_059G1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_357_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
UPI0003D61B8C related cluster n=1 Tax=unknown RepID=UPI0003D61B8C
Uncharacterized protein {ECO:0000313|EMBL:ETI92683.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_083_059G1_scaffold_357_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

279..1625
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9T8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDQ96797.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
MATE efflux family protein
L3_083_059G1_scaffold_357_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1811..3010)
DNA (1200bp) protein (400aa)
Aminotransferase class I/II n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI92684.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
amino acid aminotransferase
L3_083_059G1_scaffold_357_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3666..4343
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4W7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09840.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATP/GTP-binding protein
L3_083_059G1_scaffold_357_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4402..4617
DNA (216bp) protein (72aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=B0A9T5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDQ96794.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ferredoxin
L3_083_059G1_scaffold_357_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4646..5722
DNA (1077bp) protein (359aa)
UPI0003D5E749 related cluster n=1 Tax=unknown RepID=UPI0003D5E749
Uncharacterized protein {ECO:0000313|EMBL:ETI93578.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
2-ketoisovalerate ferredoxin reductase
L3_083_059G1_scaffold_357_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5722..6492
DNA (771bp) protein (257aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=2 Tax=Clostridiales RepID=B0A9T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93579.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
subunit of oxidoreductase
L3_083_059G1_scaffold_357_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6494..7033
DNA (540bp) protein (180aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family n=2 Tax=Clostridiales RepID=B0A9T2_9FIRM
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:EDQ96791.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
subunit of oxidoreductase
L3_083_059G1_scaffold_357_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7304..8236
DNA (933bp) protein (311aa)
Transcriptional regulator LysR family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4X3_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA09845.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
lysR; LysR family transcriptional regulator
L3_083_059G1_scaffold_357_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8538..9440
DNA (903bp) protein (301aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XMH7_9CLOT
Phosphate butyryltransferase {ECO:0000313|EMBL:CDA09846.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_059G1_scaffold_357_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9548..10627
DNA (1080bp) protein (360aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
buk; Butyrate kinase (BK) (Branched-chain carboxylicacid kinase) (EC:2.7.2.7)
UPI0003D598C4 related cluster n=1 Tax=unknown RepID=UPI0003D598C4
L3_083_059G1_scaffold_357_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11000..12997
DNA (1998bp) protein (666aa)
NAD+ synthase {ECO:0000313|EMBL:EDQ96786.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EDQ96786.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9S7_9FIRM
L3_083_059G1_scaffold_357_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13242..13652
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09849.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_059G1_scaffold_357_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13758..14228
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09850.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_059G1_scaffold_357_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14277..18647)
DNA (4371bp) protein (1457aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9S4_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDQ96783.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_059G1_scaffold_357_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18681..19331)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridiales RepID=B0A9S3_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDA09852.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
TetR family transcriptional regulator
L3_083_059G1_scaffold_357_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19705..20028)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09853.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_357_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20108..20419)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09854.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_059G1_scaffold_357_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20581..21159
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09855.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_357_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21404..21901
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R9_9FIRM
ruvC; Holliday junction resolvase
L3_083_059G1_scaffold_357_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21919..22512
DNA (594bp) protein (198aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ruvA; Holliday junction ATP-dependent DNA helicaseRuvA (EC:3.6.1.-)
UPI0003D64052 related cluster n=1 Tax=unknown RepID=UPI0003D64052
L3_083_059G1_scaffold_357_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22613..23629
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R7_9FIRM
L3_083_059G1_scaffold_357_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23722..24747
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R6_9FIRM
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_083_059G1_scaffold_357_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24777..25259
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93596.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_083_059G1_scaffold_357_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25326..26447
DNA (1122bp) protein (374aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Queuine tRNA-ribosyltransferase n=2 Tax=Clostridiales RepID=B0A9R4_9FIRM
tgt; queuine tRNA-ribosyltransferase
L3_083_059G1_scaffold_357_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26514..26795
DNA (282bp) protein (94aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93598.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
protein translocase subunit
L3_083_059G1_scaffold_357_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26855..27214
DNA (360bp) protein (120aa)
UPI0003D61B72 related cluster n=1 Tax=unknown RepID=UPI0003D61B72
Uncharacterized protein {ECO:0000313|EMBL:ETI93599.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_083_059G1_scaffold_357_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27301..27444
DNA (144bp) protein (48aa)
RSAM-modified six-cysteine peptide n=2 Tax=Clostridiales RepID=B0A9R1_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EDQ96770.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_059G1_scaffold_357_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27521..28480)
DNA (960bp) protein (320aa)
DNA binding domain excisionase family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBT3_9CLOT
DNA binding domain excisionase family {ECO:0000313|EMBL:CDA09864.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_357_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28763..29587
DNA (825bp) protein (275aa)
UPI0003D672A6 related cluster n=1 Tax=unknown RepID=UPI0003D672A6
Uncharacterized protein {ECO:0000313|EMBL:ETI93602.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
modA; molybdenum ABC transporter substrate-binding protein
Displaying items 1-30 of 42 in total

View Taxonomy