ggKbase home page

L3_083_059G1_scaffold_368

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_368_1
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

303..1271
DNA (969bp) protein (323aa)
Outer membrane autotransporter barrel n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IXZ6_9BACT
Outer membrane autotransporter barrel {ECO:0000313|EMBL:CDB55218.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L3_083_059G1_scaffold_368_2
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1423..4005)
DNA (2583bp) protein (861aa)
ATP-dependent chaperone ClpB n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW81_9BACT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ATP-dependent chaperone ClpB
L3_083_059G1_scaffold_368_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4192..5796
DNA (1605bp) protein (535aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E003_9BACT
L3_083_059G1_scaffold_368_4
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5946..6512)
DNA (567bp) protein (189aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
potassium-transporting ATPase, C subunit (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXV6_9BACT
L3_083_059G1_scaffold_368_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6542..8656)
DNA (2115bp) protein (705aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Potassium-transporting ATPase B chain n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW85_9BACT
K+-transporting ATPase subunit B
L3_083_059G1_scaffold_368_6
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8687..10387)
DNA (1701bp) protein (567aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWN5_9BACT
L3_083_059G1_scaffold_368_7
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10502..11281)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E007_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94857.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_083_059G1_scaffold_368_8
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11435..12133)
DNA (699bp) protein (233aa)
Two component transcriptional regulator winged helix family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW88_9BACT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDD94859.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
two component transcriptional regulator, winged helix family
L3_083_059G1_scaffold_368_9
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12152..14830)
DNA (2679bp) protein (893aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWP0_9BACT
osmosensitive K+ channel signal transduction histidine kinase
L3_083_059G1_scaffold_368_10
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15027..18164
DNA (3138bp) protein (1046aa)
Exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXJ8_9BACT
Exo-alpha-sialidase {ECO:0000313|EMBL:CDD94861.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_083_059G1_scaffold_368_11
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18469..19524
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E012_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94862.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_083_059G1_scaffold_368_12
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

19544..20212
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94865.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_083_059G1_scaffold_368_13
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20543..24337)
DNA (3795bp) protein (1265aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Glycoside hydrolase family 2 TIM barrel n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQC2_AKKM8
glycoside hydrolase family 2
L3_083_059G1_scaffold_368_14
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24477..25538)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94896.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_083_059G1_scaffold_368_15
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

25662..26477
DNA (816bp) protein (272aa)
TatD-related deoxyribonuclease n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E036_9BACT
TatD-related deoxyribonuclease {ECO:0000313|EMBL:CDD94897.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
TatD-related deoxyribonuclease
L3_083_059G1_scaffold_368_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

26547..27035
DNA (489bp) protein (163aa)
Peptidoglycan-binding LysM n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DXZ7_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CDD94898.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Peptidoglycan-binding LysM
L3_083_059G1_scaffold_368_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

27066..27770
DNA (705bp) protein (235aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWC2_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDD94899.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_083_059G1_scaffold_368_18
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27868..28281)
DNA (414bp) protein (138aa)
YD repeat protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQS7_AKKM8
YD repeat protein
YD repeat protein {ECO:0000313|EMBL:ACD04812.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L3_083_059G1_scaffold_368_19
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30678..31205)
DNA (528bp) protein (176aa)
YD repeat protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX99_9BACT
YD repeat protein {ECO:0000313|EMBL:CDD94731.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
YD repeat protein
L3_083_059G1_scaffold_368_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(31348..32067)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW42_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94695.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_083_059G1_scaffold_368_21
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(32090..37870)
DNA (5781bp) protein (1927aa)
YD repeat protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UPT2_AKKM8
YD repeat protein {ECO:0000313|EMBL:ACD05960.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
YD repeat protein
L3_083_059G1_scaffold_368_22
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

38259..39374
DNA (1116bp) protein (372aa)
Adenosylhomocysteinase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3E0_9BACT
Adenosylhomocysteinase {ECO:0000313|EMBL:CDD96082.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
adenosylhomocysteinase
L3_083_059G1_scaffold_368_23
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

39477..39917
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E035_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96080.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_083_059G1_scaffold_368_24
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(40222..41322)
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E1A0_9BACT
L3_083_059G1_scaffold_368_25
unknown

Not on your lists

comp(41491..41559)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 25 items

View Taxonomy