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L3_083_059G1_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_428_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

114..3176
DNA (3063bp) protein (1021aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Parabacteroides RepID=K5ZSD1_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN26215.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_059G1_scaffold_428_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3192..4898
DNA (1707bp) protein (569aa)
SusD family protein n=5 Tax=Bacteroidales RepID=D0TI93_9BACE
hypothetical protein
SusD family protein {ECO:0000313|EMBL:KDS59547.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_428_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5092..6273
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZH69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26217.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_059G1_scaffold_428_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6507..8075
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEX2_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84448.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8091..9866
DNA (1776bp) protein (592aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6LEX1_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84449.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9863..11332
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ARL3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84450.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11396..12322
DNA (927bp) protein (309aa)
UDP-N-acetylmuramate-alanine ligase n=4 Tax=Bacteroidales RepID=A6LEW9_PARD8
UDP-N-acetylmuramate-alanine ligase
Mur ligase middle domain protein {ECO:0000313|EMBL:KDS59511.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_428_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12377..12808
DNA (432bp) protein (144aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS59499.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_428_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12823..13686
DNA (864bp) protein (288aa)
dTDP-4-dehydrorhamnose reductase n=4 Tax=Bacteroidales RepID=D0TI86_9BACE
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKN26223.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_059G1_scaffold_428_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13716..15296
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=3 Tax=Bacteroidales RepID=D0TI85_9BACE
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
peptide chain release factor 3
L3_083_059G1_scaffold_428_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15298..16305
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ARL7_9PORP
Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:KEJ84455.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
thiamine biosynthesis lipoprotein ApbE
L3_083_059G1_scaffold_428_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16437..17129)
DNA (693bp) protein (231aa)
TIGR02254 family HAD hydrolase n=1 Tax=Parabacteroides sp. D25 RepID=K6AR36_9PORP
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:KEJ84456.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
HAD superfamily hydrolase
L3_083_059G1_scaffold_428_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17129..18001)
DNA (873bp) protein (291aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW3_PARD8
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:KDS59530.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_428_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18021..18725)
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Ribosomal RNA small subunit methyltransferase I n=6 Tax=Bacteroidales RepID=A6LEW2_PARD8
methyltransferase
L3_083_059G1_scaffold_428_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18735..19430)
DNA (696bp) protein (232aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LEW1_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07784.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_059G1_scaffold_428_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19540..20955)
DNA (1416bp) protein (472aa)
ATP-dependent exonuclease V, alpha subunit-helicase superfamily I member n=2 Tax=Parabacteroides distasonis RepID=A6LEW0_PARD8
exonuclease V subunit alpha
ATP-dependent exonuclease V, alpha subunit-helicase superfamily I member {ECO:0000313|EMBL:ABR44224.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_059G1_scaffold_428_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21049..21684
DNA (636bp) protein (212aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LEV9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS49589.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_083_059G1_scaffold_428_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21697..22521
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZH86_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26232.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_059G1_scaffold_428_19
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22512..23069
DNA (558bp) protein (186aa)
RsmD family RNA methyltransferase n=2 Tax=Parabacteroides RepID=K6BDU3_9PORP
methyltransferase
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EKN26233.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_059G1_scaffold_428_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23041..24477)
DNA (1437bp) protein (479aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Cardiolipin synthase n=6 Tax=Bacteroidales RepID=D7IV61_9BACE
cardiolipin synthetase
L3_083_059G1_scaffold_428_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25065..26315
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ICG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84468.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26327..28657
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEV4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44218.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_059G1_scaffold_428_23
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28722..29453
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZHB5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84471.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29558..30532)
DNA (975bp) protein (325aa)
Hemolysin A n=8 Tax=Bacteroidales RepID=A6LEV2_PARD8
hemolysin A
Hemolysin {ECO:0000313|EMBL:EFI07793.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_059G1_scaffold_428_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30545..31369)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ASI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84473.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_059G1_scaffold_428_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31846..32763
DNA (918bp) protein (306aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IRZ9_9PORP
mraW; S-adenosyl-methyltransferase MraW
L3_083_059G1_scaffold_428_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32776..33129
DNA (354bp) protein (118aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEU9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS59517.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_059G1_scaffold_428_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33148..35343
DNA (2196bp) protein (732aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDC0_9PORP
Cell division protein FtsI (Penicillin-binding protein 3) {ECO:0000313|EMBL:KEJ84476.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
penicillin-binding protein
L3_083_059G1_scaffold_428_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35346..36806
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IV70_9BACE
L3_083_059G1_scaffold_428_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36820..38079
DNA (1260bp) protein (420aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Bacteroidales RepID=MRAY_PARD8
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
Displaying items 1-30 of 40 in total

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