ggKbase home page

L3_083_059G1_scaffold_432

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_432_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

367..4656
DNA (4290bp) protein (1430aa)
Putative uncharacterized protein n=4 Tax=Clostridium RepID=G5F844_9CLOT
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ERI76833.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
CoA-substrate-specific enzyme activase, putative
L3_083_059G1_scaffold_432_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4867..5349
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SNQ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95136.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_432_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5473..6690)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SNQ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95137.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Outer membrane efflux protein.
L3_083_059G1_scaffold_432_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6703..7929)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BFC1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76829.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_083_059G1_scaffold_432_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7931..10945)
DNA (3015bp) protein (1005aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNQ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07472.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cation/multidrug efflux pump
L3_083_059G1_scaffold_432_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10964..12154)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F839_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07471.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RND family efflux transporter, MFP subunit
L3_083_059G1_scaffold_432_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12414..13091
DNA (678bp) protein (226aa)
Winged helix family Two component transcriptional regulator n=4 Tax=Clostridium RepID=E7GJ99_CLOSY
Winged helix family Two component transcriptional regulator {ECO:0000313|EMBL:EGA95141.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_083_059G1_scaffold_432_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13088..14164
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNR2_CLOSY
Signal transduction histidine kinase
L3_083_059G1_scaffold_432_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14313..15110)
DNA (798bp) protein (266aa)
Tyrosine recombinase XerC n=4 Tax=Clostridium RepID=E7GJA1_CLOSY
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tyrosine recombinase XerD subunit
L3_083_059G1_scaffold_432_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15422..15967)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D5R9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95144.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_059G1_scaffold_432_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16067..16666)
DNA (600bp) protein (200aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium symbiosum RepID=E9SNR5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95145.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
NUDIX hydrolase
L3_083_059G1_scaffold_432_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16743..17540)
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNR6_CLOSY
L3_083_059G1_scaffold_432_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17565..18548)
DNA (984bp) protein (328aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BFB2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07464.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cell wall binding repeat-containing protein
L3_083_059G1_scaffold_432_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19068..19859)
DNA (792bp) protein (264aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNR9_CLOSY
Nitroreductase {ECO:0000313|EMBL:EGA95148.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
nitroreductase
L3_083_059G1_scaffold_432_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20091..21296)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9ZM99_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI74135.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Site-specific recombinase XerD
L3_083_059G1_scaffold_432_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21371..21583)
DNA (213bp) protein (71aa)
Excisionase from transposon Tn916 n=2 Tax=Clostridium RepID=U2D3M7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ENZ40949.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
excisionase
L3_083_059G1_scaffold_432_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22010..22933)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AWR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40948.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_083_059G1_scaffold_432_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23511..25733)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B7H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40944.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_083_059G1_scaffold_432_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25776..26300)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R0AWR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40943.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_083_059G1_scaffold_432_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26326..27042)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B9K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40942.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_083_059G1_scaffold_432_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27102..27572)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BPJ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI74145.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_059G1_scaffold_432_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27593..27952)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZM91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40940.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_083_059G1_scaffold_432_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28315..28569)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B7G6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40939.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_083_059G1_scaffold_432_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28607..29032)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AWR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40938.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_083_059G1_scaffold_432_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29101..29508)
DNA (408bp) protein (136aa)
Hemerythrin-like metal-binding domain-containing protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B9J6_9CLOT
Hemerythrin-like metal-binding domain-containing protein {ECO:0000313|EMBL:ENZ40937.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hemerythrin-like metal-binding domain
L3_083_059G1_scaffold_432_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29531..29929)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZM74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40936.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_083_059G1_scaffold_432_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29929..30300)
DNA (372bp) protein (124aa)
Flagellar protein FliS n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZM86_9CLOT
Flagellar protein FliS {ECO:0000313|EMBL:ENZ40935.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
flagellar protein FliS
L3_083_059G1_scaffold_432_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30337..32769)
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B7G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40934.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Flagellar capping protein
L3_083_059G1_scaffold_432_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32948..33709
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AWQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40933.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ATPases involved in chromosome partitioning
L3_083_059G1_scaffold_432_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33727..34314
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CY65_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI74157.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
late competence development protein ComFB
Displaying items 1-30 of 32 in total

View Taxonomy