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L3_083_059G1_scaffold_475

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_475_1
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(180..926)
DNA (747bp) protein (249aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Demethylmenaquinone methyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BE38_9FIRM
ubiquinone/menaquinone biosynthesis methyltransferase
L3_083_059G1_scaffold_475_2
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1318..2580
DNA (1263bp) protein (421aa)
Serine/threonine transporter SstT n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DK86_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
sodium:dicarboxylate symporter
L3_083_059G1_scaffold_475_3
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2697..3881)
DNA (1185bp) protein (395aa)
Cation diffusion facilitator family transporter n=1 Tax=Veillonella sp. CAG:933 RepID=R5BES1_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CCX53858.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
cation diffusion facilitator family transporter
L3_083_059G1_scaffold_475_4
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4216..5733)
DNA (1518bp) protein (506aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM50_9FIRM
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CCX53857.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
L3_083_059G1_scaffold_475_5
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6072..7625)
DNA (1554bp) protein (518aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQW9_9FIRM
L3_083_059G1_scaffold_475_6
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7732..9036)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D7K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU79201.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Na+/H+ antiporter NhaC-like protein
L3_083_059G1_scaffold_475_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9392..12430)
DNA (3039bp) protein (1013aa)
Transcriptional activator n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHZ7_9FIRM
Transcriptional activator {ECO:0000313|EMBL:CCX53854.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
transcriptional activator
L3_083_059G1_scaffold_475_8
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12758..13492)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein BN814_01560 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BET5_9FIRM
Probable transcriptional regulatory protein BN814_01560 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_9
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13606..14181)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BFC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX54038.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_10
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14376..15662)
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Enolase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRJ8_9FIRM
enolase
L3_083_059G1_scaffold_475_11
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15819..17351)
DNA (1533bp) protein (511aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIQ4_9FIRM
phosphoglycerate mutase
L3_083_059G1_scaffold_475_12
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17561..18313)
DNA (753bp) protein (251aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Triosephosphate isomerase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BFB8_9FIRM
tpiA; triosephosphate isomerase
L3_083_059G1_scaffold_475_13
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18323..19501)
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Phosphoglycerate kinase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRJ3_9FIRM
phosphoglycerate kinase
L3_083_059G1_scaffold_475_14
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19615..20622)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIP9_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L3_083_059G1_scaffold_475_15
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20733..21758)
DNA (1026bp) protein (342aa)
Sugar-binding domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BFB4_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CCX54028.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
DeoR family transcriptional regulator
L3_083_059G1_scaffold_475_16
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22467..22751)
DNA (285bp) protein (95aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRJ0_9FIRM
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:CCX54026.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
propeptide PepSY amd peptidase M4
L3_083_059G1_scaffold_475_17
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23023..23649)
DNA (627bp) protein (209aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Uracil phosphoribosyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIP3_9FIRM
uracil phosphoribosyltransferase
L3_083_059G1_scaffold_475_18
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23727..24968)
DNA (1242bp) protein (414aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Serine hydroxymethyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BMS5_9FIRM
glycine hydroxymethyltransferase
L3_083_059G1_scaffold_475_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25037..25474)
DNA (438bp) protein (146aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRI5_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CCX54021.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L3_083_059G1_scaffold_475_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25660..26097)
DNA (438bp) protein (146aa)
Protein tyrosine phosphatase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIP1_9FIRM
Protein tyrosine phosphatase {ECO:0000313|EMBL:CCX54019.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
protein tyrosine phosphatase
L3_083_059G1_scaffold_475_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26171..27256)
DNA (1086bp) protein (362aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BMS0_9FIRM
Sua5/YciO/YrdC/YwlC family protein
L3_083_059G1_scaffold_475_22
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27240..28133)
DNA (894bp) protein (298aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Release factor glutamine methyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BER7_9FIRM
HemK family modification methylase
L3_083_059G1_scaffold_475_23
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28126..29211)
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3P9_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
peptide chain release factor 1
L3_083_059G1_scaffold_475_24
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29291..30178)
DNA (888bp) protein (296aa)
PF07136 family protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRB8_9FIRM
PF07136 family protein {ECO:0000313|EMBL:CCX53986.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_25
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(30254..30451)
DNA (198bp) protein (66aa)
50S ribosomal protein L31 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEK9_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L31
L3_083_059G1_scaffold_475_26
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30540..30845)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53984.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_27
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30896..32377)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BF49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53983.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_28
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32379..33017)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Endonuclease III n=1 Tax=Veillonella sp. CAG:933 RepID=R5BMK9_9FIRM
endonuclease III
L3_083_059G1_scaffold_475_29
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33272..33514
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53981.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L3_083_059G1_scaffold_475_30
unknown

Not on your lists

comp(33577..33642)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 30 items

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