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L3_083_059G1_scaffold_563

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_563_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84..464
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C142_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20750.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_083_059G1_scaffold_563_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(491..1327)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67667.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1382..1597)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8H7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15922.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_083_059G1_scaffold_563_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1615..1956)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A6BHJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1953..3764)
DNA (1812bp) protein (604aa)
TraG/TraD family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJK3_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:ERK43924.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
TraG/TraD family protein
L3_083_059G1_scaffold_563_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3751..3954)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67544.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3967..4893)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67545.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4900..5826)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1X8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20756.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_083_059G1_scaffold_563_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5801..7252)
DNA (1452bp) protein (484aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHK4_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDM62755.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Relaxase/Mobilisation nuclease domain.
L3_083_059G1_scaffold_563_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7254..7613)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=V8C031_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20758.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L3_083_059G1_scaffold_563_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7610..8578)
DNA (969bp) protein (323aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A6BHK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD20759.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_083_059G1_scaffold_563_12
unknown

Not on your lists

comp(8532..8675)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_083_059G1_scaffold_563_13
unknown

Not on your lists

comp(8672..8782)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_083_059G1_scaffold_563_14
unknown

Not on your lists

comp(8802..8990)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_083_059G1_scaffold_563_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8980..9174)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55322.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9171..10142)
DNA (972bp) protein (324aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8C0Z1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45566.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10245..10577)
DNA (333bp) protein (111aa)
Virulence-associated protein D (VapD) conserved region n=2 Tax=Clostridiales RepID=B0NF67_CLOSV
Virulence-associated protein D (VapD) conserved region {ECO:0000313|EMBL:EDS06745.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
VapD domain protein
L3_083_059G1_scaffold_563_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10577..10867)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF66_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN37164.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_083_059G1_scaffold_563_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10941..11282)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55325.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11303..11641)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4Q9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26221.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_083_059G1_scaffold_563_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11775..19595)
DNA (7821bp) protein (2607aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72697.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA methylase
L3_083_059G1_scaffold_563_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19609..19965)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72698.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_059G1_scaffold_563_23
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19958..20185)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P632_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ05226.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_083_059G1_scaffold_563_24
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20197..20868)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KA54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40317.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_083_059G1_scaffold_563_25
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21011..25225)
DNA (4215bp) protein (1405aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VJT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX69124.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
collagen adhesion protein
L3_083_059G1_scaffold_563_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25446..26372)
DNA (927bp) protein (309aa)
ParB-like protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QYZ6_9FIRM
ParB-like protein {ECO:0000313|EMBL:ERK43942.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
ParB-like partition proteins
L3_083_059G1_scaffold_563_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26326..27153)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IH48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21141.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
ATPases involved in chromosome partitioning
L3_083_059G1_scaffold_563_28
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27294..27779)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J6V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23428.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_083_059G1_scaffold_563_29
unknown

Not on your lists

comp(28154..28342)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 29 items

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