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L3_083_059G1_scaffold_609

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_609_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(396..1061)
DNA (666bp) protein (222aa)
UPI0003D5D9CD related cluster n=1 Tax=unknown RepID=UPI0003D5D9CD
Uncharacterized protein {ECO:0000313|EMBL:ETI92383.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_083_059G1_scaffold_609_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1104..2168)
DNA (1065bp) protein (355aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Clostridiales RepID=B0AB09_9FIRM
L3_083_059G1_scaffold_609_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2245..3369)
DNA (1125bp) protein (375aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
RIP metalloprotease RseP n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB08_9FIRM
putative membrane-associated zinc metalloprotease
L3_083_059G1_scaffold_609_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3382..4533)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB07_9FIRM
L3_083_059G1_scaffold_609_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4684..5463)
DNA (780bp) protein (260aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Phosphatidate cytidylyltransferase n=2 Tax=Clostridiales RepID=B0AB06_9FIRM
sA; phosphatidate cytidylyltransferase
L3_083_059G1_scaffold_609_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5475..6206)
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Isoprenyl transferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y398_9CLOT
uppS; UDP pyrophosphate synthetase
L3_083_059G1_scaffold_609_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6235..6438)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AB04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11136.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_609_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6441..6995)
DNA (555bp) protein (185aa)
UPI0003D64EB8 related cluster n=1 Tax=unknown RepID=UPI0003D64EB8
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
frr; ribosome recycling factor
L3_083_059G1_scaffold_609_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7023..7727)
DNA (705bp) protein (235aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Uridylate kinase n=2 Tax=Clostridiales RepID=B0AB02_9FIRM
pyrH; uridylate kinase
L3_083_059G1_scaffold_609_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7822..8733)
DNA (912bp) protein (304aa)
Elongation factor Ts n=2 Tax=Clostridiales RepID=B0AB01_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
tsf; elongation factor Ts
L3_083_059G1_scaffold_609_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8867..9592)
DNA (726bp) protein (242aa)
30S ribosomal protein S2 n=3 Tax=Clostridiales RepID=B0AB00_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpsB; 30S ribosomal protein S2
L3_083_059G1_scaffold_609_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9852..11090)
DNA (1239bp) protein (413aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ9_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDQ95782.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_083_059G1_scaffold_609_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11159..12205)
DNA (1047bp) protein (349aa)
Ion channel n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ8_9FIRM
Ion channel {ECO:0000313|EMBL:EDQ95781.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_059G1_scaffold_609_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12316..12660)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95780.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_083_059G1_scaffold_609_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12681..13361)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95779.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_083_059G1_scaffold_609_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13363..14253)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95778.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_083_059G1_scaffold_609_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14268..15359)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95777.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATPase, AAA_5
L3_083_059G1_scaffold_609_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15412..16638)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95776.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
metallopeptidase
L3_083_059G1_scaffold_609_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16767..17933)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11124.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_609_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17959..18885)
DNA (927bp) protein (309aa)
Non-specific serine/threonine protein kinase n=2 Tax=Clostridiales RepID=B0AAZ1_9FIRM
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CDA11123.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative serine/threonine protein kinase
L3_083_059G1_scaffold_609_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19028..20278)
DNA (1251bp) protein (417aa)
VanW-like protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y387_9CLOT
VanW-like protein {ECO:0000313|EMBL:CDA11122.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
vancomycin resistance protein
L3_083_059G1_scaffold_609_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20465..20662)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AD54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95200.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_083_059G1_scaffold_609_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20896..21150
DNA (255bp) protein (85aa)
Putative iron-only hydrogenase system regulator n=2 Tax=Clostridiales RepID=B0AD55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI89940.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_083_059G1_scaffold_609_24

Not on your lists

21304..21870
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AD56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17810.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_083_059G1_scaffold_609_25

Not on your lists

comp(21935..22132)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AD57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17811.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_059G1_scaffold_609_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22227..23156)
DNA (930bp) protein (310aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0AD58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11117.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_609_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23305..23892)
DNA (588bp) protein (196aa)
SH3 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XQQ1_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDA11116.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_083_059G1_scaffold_609_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24262..25308)
DNA (1047bp) protein (349aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AD60_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:CDA11115.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
xanthine and CO dehydrogenases maturation factor
L3_083_059G1_scaffold_609_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25319..26020)
DNA (702bp) protein (234aa)
UPI0003D64015 related cluster n=1 Tax=unknown RepID=UPI0003D64015
Uncharacterized protein {ECO:0000313|EMBL:ETI96134.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
Displaying 29 items

View Taxonomy