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L3_083_059G1_scaffold_646

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_646_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..755)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UA01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67991.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aldo/keto reductases, related to diketogulonate reductase
L3_083_059G1_scaffold_646_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1089..1823)
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AZB7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49824.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_646_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1895..2410)
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZB8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49825.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted metal-binding protein related to the C-terminal domain of SecA
L3_083_059G1_scaffold_646_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2593..2808
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67988.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_083_059G1_scaffold_646_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2819..2983)
DNA (165bp) protein (55aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZC1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49827.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_059G1_scaffold_646_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3232..4512)
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=3 Tax=Lachnospiraceae RepID=A7AZC2_RUMGN
L3_083_059G1_scaffold_646_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4628..6187)
DNA (1560bp) protein (520aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EDN79128.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN79128.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZC3_RUMGN
L3_083_059G1_scaffold_646_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6367..6639
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AZC4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49831.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_059G1_scaffold_646_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6745..8142)
DNA (1398bp) protein (466aa)
Transcriptional regulator, GntR family n=3 Tax=Lachnospiraceae RepID=A7AZC5_RUMGN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDN79130.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_083_059G1_scaffold_646_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8156..9820)
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=4 Tax=Clostridiales RepID=A7AZC6_RUMGN
L3_083_059G1_scaffold_646_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9996..11465
DNA (1470bp) protein (490aa)
Transporter n=3 Tax=Lachnospiraceae RepID=A7AZC7_RUMGN
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sodium:neurotransmitter symporter
L3_083_059G1_scaffold_646_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11524..12228)
DNA (705bp) protein (235aa)
Hydrolase, NUDIX family n=4 Tax=Clostridiales RepID=A7AZC8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20565.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ADP-ribose pyrophosphatase
L3_083_059G1_scaffold_646_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12310..13794)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1G1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20566.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_083_059G1_scaffold_646_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13811..14308)
DNA (498bp) protein (166aa)
Sigma-70 region 2 n=4 Tax=Clostridiales RepID=A7AZD0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49837.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_083_059G1_scaffold_646_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14443..15738)
DNA (1296bp) protein (432aa)
UPF0597 protein RUMGNA_00647 n=3 Tax=Lachnospiraceae RepID=A7AZD1_RUMGN
UPF0597 protein HMPREF0991_00172 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_646_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15853..16200)
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZD2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49839.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_059G1_scaffold_646_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16433..16951
DNA (519bp) protein (173aa)
Nitroreductase family protein n=3 Tax=Lachnospiraceae RepID=A7AZD3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20570.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
nitroreductase
L3_083_059G1_scaffold_646_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16973..17419
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Lachnospiraceae RepID=A7AZD4_RUMGN
L3_083_059G1_scaffold_646_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17414..17797)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0I2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49842.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_059G1_scaffold_646_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17910..18134
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZD6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67972.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted transcriptional regulator
L3_083_059G1_scaffold_646_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18227..18490)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZD7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79142.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_083_059G1_scaffold_646_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18654..19277)
DNA (624bp) protein (208aa)
RNA polymerase sigma factor n=3 Tax=Lachnospiraceae RepID=A7AZD8_RUMGN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
RNA polymerase, sigma 30 subunit, SigH
L3_083_059G1_scaffold_646_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19297..20064)
DNA (768bp) protein (256aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Clostridiales RepID=A7AZD9_RUMGN
RNA methyltransferase {ECO:0000313|EMBL:EGN49845.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_059G1_scaffold_646_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20051..20518)
DNA (468bp) protein (156aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Mini-ribonuclease 3 n=3 Tax=Lachnospiraceae RepID=A7AZE0_RUMGN
hypothetical protein
L3_083_059G1_scaffold_646_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20503..21909)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=4 Tax=Clostridiales RepID=A7AZE1_RUMGN
L3_083_059G1_scaffold_646_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21896..22603)
DNA (708bp) protein (236aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=4 Tax=Clostridiales RepID=A7AZE2_RUMGN
L3_083_059G1_scaffold_646_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22947..24074)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZN6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49849.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_059G1_scaffold_646_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24089..24634)
DNA (546bp) protein (182aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Lachnospiraceae RepID=A7AZE4_RUMGN
Displaying 28 items

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