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L3_083_059G1_scaffold_889

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_889_1
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..472
DNA (471bp) protein (157aa)
Elongation factor Tu n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D327_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
translation elongation factor Tu
L3_083_059G1_scaffold_889_2
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


642..953
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Veillonella RepID=K9DNJ4_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S10
L3_083_059G1_scaffold_889_3
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


969..1610
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=2 Tax=Veillonella RepID=K9D6Z0_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L3
L3_083_059G1_scaffold_889_4
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1634..2257
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM20_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L4
L3_083_059G1_scaffold_889_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2257..2541
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=2 Tax=Veillonella RepID=K9D3V7_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
ribosomal protein L25/L23
L3_083_059G1_scaffold_889_6
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2567..3397
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BUX2_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L2
L3_083_059G1_scaffold_889_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3421..3702
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BR43_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S19
L3_083_059G1_scaffold_889_8
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3721..4056
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Veillonella RepID=K9D6Z2_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L22
L3_083_059G1_scaffold_889_9
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4074..4742
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=2 Tax=Veillonella RepID=K9DJH6_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S3
L3_083_059G1_scaffold_889_10
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4742..5179
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=2 Tax=Veillonella RepID=K9D3W1_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L16
L3_083_059G1_scaffold_889_11
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5169..5369
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=2 Tax=Veillonella RepID=K9D335_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L29
L3_083_059G1_scaffold_889_12
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5403..5669
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BR48_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S17
L3_083_059G1_scaffold_889_13
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5694..5879
DNA (186bp) protein (62aa)
50S ribosomal protein L14 n=2 Tax=Veillonella RepID=K9D6Z4_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L14
L3_083_059G1_scaffold_889_14
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


6003..6329
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM29_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L24
L3_083_059G1_scaffold_889_15
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


6355..6894
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Veillonella RepID=K9D3W3_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L5
L3_083_059G1_scaffold_889_16
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


6912..7181
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=2 Tax=Veillonella RepID=K9D339_9FIRM
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S14
L3_083_059G1_scaffold_889_17
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


7210..7608
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Veillonella RepID=K9DNK5_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S8
L3_083_059G1_scaffold_889_18
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


7632..8177
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIG3_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L6
L3_083_059G1_scaffold_889_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8209..8571
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BI44_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L18
L3_083_059G1_scaffold_889_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8590..9090
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BUY1_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S5
L3_083_059G1_scaffold_889_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9109..9288
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=2 Tax=Veillonella RepID=K9D343_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L30
L3_083_059G1_scaffold_889_22
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9311..9751
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Veillonella RepID=K9DNK8_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L15
L3_083_059G1_scaffold_889_23
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9753..11015
DNA (1263bp) protein (421aa)
Protein translocase subunit SecY n=1 Tax=Veillonella sp. CAG:933 RepID=R5BR64_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
preprotein translocase subunit SecY
L3_083_059G1_scaffold_889_24
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11029..11592
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Adenylate kinase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BM45_9FIRM
adenylate kinase
L3_083_059G1_scaffold_889_25
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11596..12366
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Methionine aminopeptidase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3W9_9FIRM
methionine aminopeptidase
L3_083_059G1_scaffold_889_26
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12388..12606
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=7 Tax=Veillonella RepID=E1L666_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
translation initiation factor IF-1
L3_083_059G1_scaffold_889_27
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12636..12749
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Veillonella RepID=K9DNL6_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L36
L3_083_059G1_scaffold_889_28
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


12772..13140
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BUZ7_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S13
L3_083_059G1_scaffold_889_29
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


13158..13547
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Veillonella RepID=K9DJJ5_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S11
L3_083_059G1_scaffold_889_30
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13630..14634
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Veillonella sp. CAG:933 RepID=R5BII8_9FIRM
DNA-directed RNA polymerase subunit alpha
Displaying items 1-30 of 39 in total

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