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L3_083_059G1_scaffold_1178

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_1178_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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143..454
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6A803_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24129.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Protein of unknown function (DUF2958).
L3_083_059G1_scaffold_1178_2
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

528..764
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D1JWP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ23801.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_083_059G1_scaffold_1178_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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778..1029
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RFZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO47953.2}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
hypothetical protein
L3_083_059G1_scaffold_1178_4
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1066..1503
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RFZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO47952.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L3_083_059G1_scaffold_1178_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1645..3171)
DNA (1527bp) protein (509aa)
HipA-like N-terminal domain protein n=4 Tax=Bacteroidales RepID=B3JIH5_9BACE
HipA-like N-terminal domain protein {ECO:0000313|EMBL:KDS69769.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
capsule biosynthesis enzyme-like protein
L3_083_059G1_scaffold_1178_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3161..3481)
DNA (321bp) protein (107aa)
Toxin-antitoxin system, antitoxin component, Xre family n=3 Tax=Bacteroidales RepID=C3RFZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN24126.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Helix-turn-helix.
L3_083_059G1_scaffold_1178_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4067..5251
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP49_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09187.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_059G1_scaffold_1178_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5977..6801)
DNA (825bp) protein (275aa)
Integrase core domain protein n=2 Tax=Bacteroidales RepID=C7XG92_9PORP
Integrase core domain protein {ECO:0000313|EMBL:EEU49052.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
transposase
L3_083_059G1_scaffold_1178_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6828..7205)
DNA (378bp) protein (126aa)
Transposase n=2 Tax=Parabacteroides RepID=E1YV22_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22300.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_059G1_scaffold_1178_10
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7677..8294
DNA (618bp) protein (206aa)
DNA repair protein RadC n=9 Tax=Bacteroidales RepID=B3JIE2_9BACE
DNA repair protein RadC {ECO:0000313|EMBL:EEO58686.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
DNA repair protein RadC
L3_083_059G1_scaffold_1178_11
unknown

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8272..8472
DNA (201bp) protein (67aa)

This feature has no annotations

L3_083_059G1_scaffold_1178_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8478..8888
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AJR3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23815.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_059G1_scaffold_1178_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9237..9644
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C3RFY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23814.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_059G1_scaffold_1178_14
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9696..10289)
DNA (594bp) protein (198aa)
Resolvase, N-terminal domain protein n=9 Tax=Bacteroidales RepID=B3JID8_9BACE
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDV01327.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Resolvase domain
L3_083_059G1_scaffold_1178_15
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10329..10658)
DNA (330bp) protein (110aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JID7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01326.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_083_059G1_scaffold_1178_16
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10689..11315)
DNA (627bp) protein (209aa)
Putative uncharacterized protein id=2872563 bin=GWF2_Bacteroidetes_29_10 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
L3_083_059G1_scaffold_1178_17

Not on your lists

comp(11299..12549)
DNA (1251bp) protein (417aa)
ATPase (Fragment) n=1 Tax=gut metagenome RepID=J9CTV6_9ZZZZ
ATPase {ECO:0000313|EMBL:EJX03646.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
ATPase
L3_083_059G1_scaffold_1178_18
unknown

Not on your lists

12635..12880
DNA (246bp) protein (82aa)

This feature has no annotations

L3_083_059G1_scaffold_1178_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12840..13520)
DNA (681bp) protein (227aa)
Putative DNA-binding protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SPJ6_BACT6
Virulence RhuM family protein {ECO:0000313|EMBL:EXZ20009.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
DNA-binding protein
L3_083_059G1_scaffold_1178_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13947..14195
DNA (249bp) protein (83aa)
SpoVT/AbrB-like protein n=5 Tax=Bacteroidales RepID=B3JID2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV65576.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
MazF family transcriptional regulator
L3_083_059G1_scaffold_1178_21
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14189..14509
DNA (321bp) protein (107aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
mRNA interferase n=4 Tax=Bacteroidales RepID=C3QLA1_9BACE
transcriptional modulator of maze/toxin, mazf
L3_083_059G1_scaffold_1178_22
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14506..14733
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C3QLA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ01695.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_083_059G1_scaffold_1178_23
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14833..15117
DNA (285bp) protein (95aa)
DNA-binding protein HU n=4 Tax=Bacteroidales RepID=C3QLA3_9BACE
DNA-binding protein HU {ECO:0000313|EMBL:EEO52737.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Bacterial DNA-binding protein
L3_083_059G1_scaffold_1178_24
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15114..15386
DNA (273bp) protein (91aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=B3JIC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01317.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_083_059G1_scaffold_1178_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15448..15825)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=B3JIC7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN18743.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_083_059G1_scaffold_1178_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15840..16166)
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C3QLA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEU49062.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_059G1_scaffold_1178_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16212..16466)
DNA (255bp) protein (85aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=B3JIC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEU49061.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Displaying 27 items

View Taxonomy