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L3_083_059G1_scaffold_1883

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_059G1_scaffold_1883_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1491
DNA (1491bp) protein (497aa)
Transposase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0V2_BIFBU
Transposase
Transposase {ECO:0000313|EMBL:ABE95793.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_083_059G1_scaffold_1883_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1488..2267
DNA (780bp) protein (260aa)
Transposase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0V3_BIFBU
Transposase
Transposase {ECO:0000313|EMBL:ABE95794.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_083_059G1_scaffold_1883_3
unknown

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2323..2538
DNA (216bp) protein (72aa)

This feature has no annotations

L3_083_059G1_scaffold_1883_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2549..3244
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X3_BIFBR
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KEY30698.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
cas4; CRISPR-associated protein Cas4
L3_083_059G1_scaffold_1883_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3241..3519
DNA (279bp) protein (93aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X4_BIFBR
CRISPR-associated protein Cas1
L3_083_059G1_scaffold_1883_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3503..4240
DNA (738bp) protein (246aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X4_BIFBR
CRISPR-associated protein Cas1
L3_083_059G1_scaffold_1883_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4411..4731
DNA (321bp) protein (107aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
CRISPR-associated endoribonuclease Cas2 n=3 Tax=Bifidobacterium breve RepID=F6C694_BIFBA
CRISPR-associated protein Cas2
L3_083_059G1_scaffold_1883_8
unknown

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comp(4860..5189)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_083_059G1_scaffold_1883_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5352..5546
DNA (195bp) protein (65aa)
Helix-turn-helix motif containing protein n=2 Tax=Bifidobacterium bifidum RepID=K2H7N5_BIFBI
PbsX family transcriptional regulator {ECO:0000313|EMBL:KEY30695.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
PbsX family transcriptional regulator
L3_083_059G1_scaffold_1883_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5647..5907
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2LZT1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52219.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_083_059G1_scaffold_1883_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5920..6174
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M2F0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52218.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_083_059G1_scaffold_1883_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6559..6759
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MKR7_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY30692.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_059G1_scaffold_1883_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6759..7187
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XW92_BIFLN
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L3_083_059G1_scaffold_1883_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7278..7814
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9W1_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54805.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Displaying 14 items

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