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L3_083_088G1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_8_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(342..818)
DNA (477bp) protein (159aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9X5S1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08912.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
MarR family transcriptional regulator
L3_083_088G1_scaffold_8_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1093..2283
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JUU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61541.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
class I and II aminotransferase
L3_083_088G1_scaffold_8_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2280..3977
DNA (1698bp) protein (566aa)
Coenzyme A disulfide reductase {ECO:0000313|EMBL:KJJ68518.1}; EC=1.8.1.14 {ECO:0000313|EMBL:KJJ68518.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNB1_9CLOT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_083_088G1_scaffold_8_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4029..5435
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJ37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58366.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Predicted Na+/dicarboxylate symporter
L3_083_088G1_scaffold_8_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5642..7636
DNA (1995bp) protein (665aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRR9_9CLOT
L3_083_088G1_scaffold_8_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7708..8568)
DNA (861bp) protein (287aa)
AraC-like ligand binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL2_9FIRM
AraC-like ligand binding domain protein {ECO:0000313|EMBL:EEQ57697.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AraC family transcriptional regulator
L3_083_088G1_scaffold_8_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8722..9579
DNA (858bp) protein (286aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Diaminopimelate epimerase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPK9_9CLOT
diaminopimelate epimerase
L3_083_088G1_scaffold_8_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9706..11043
DNA (1338bp) protein (446aa)
Glutamine synthetase, type I {ECO:0000313|EMBL:EEQ57695.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEQ57695.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glutamine synthetase, type I n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL0_9FIRM
glutamine synthetase, type I
L3_083_088G1_scaffold_8_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11079..11627
DNA (549bp) protein (183aa)
ANTAR domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK9_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:EEQ57694.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ANTAR domain-containing protein
L3_083_088G1_scaffold_8_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11640..12497
DNA (858bp) protein (286aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPK6_9CLOT
L3_083_088G1_scaffold_8_11
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12646..13884
DNA (1239bp) protein (413aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FEZ3_9CLOT
LL-diaminopimelate aminotransferase
L3_083_088G1_scaffold_8_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13964..14746
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96590.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
cell wall hydrolase/autolysin
L3_083_088G1_scaffold_8_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14837..15427
DNA (591bp) protein (197aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RG94_9CLOT
putative 5-formyltetrahydrofolate cyclo-ligase family protein
L3_083_088G1_scaffold_8_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15493..16749
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63381.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
peptidoglycan-binding domain-containing protein
L3_083_088G1_scaffold_8_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17114..18187
DNA (1074bp) protein (358aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILV3_9CLOT
L3_083_088G1_scaffold_8_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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18187..21405
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHG0_9FIRM
L3_083_088G1_scaffold_8_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21633..22133
DNA (501bp) protein (167aa)
CarD family transcriptional regulator n=4 Tax=Clostridium RepID=N9Z7T6_9CLOT
CarD family transcriptional regulator {ECO:0000313|EMBL:ENZ16549.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator
L3_083_088G1_scaffold_8_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22181..23110)
DNA (930bp) protein (310aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=3 Tax=Clostridium bolteae RepID=A8RQP6_9CLOT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_083_088G1_scaffold_8_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23289..23756
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KMP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63387.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
CAAX amino terminal protease family.
L3_083_088G1_scaffold_8_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23783..24802
DNA (1020bp) protein (340aa)
Glycosyltransferase n=4 Tax=Clostridium RepID=N9Z8Z5_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:ENZ46873.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
family 2 glycosyl transferase
L3_083_088G1_scaffold_8_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24955..27336
DNA (2382bp) protein (794aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2E5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00444.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_088G1_scaffold_8_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27377..28042)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPG6_9CLOT
PAP2 superfamily protein {ECO:0000313|EMBL:KJJ72390.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
phosphoesterase PA-phosphatase-like protein
L3_083_088G1_scaffold_8_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28276..29127
DNA (852bp) protein (284aa)
SIS domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENB2_9FIRM
SIS domain protein {ECO:0000313|EMBL:EEQ59624.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
RpiR family transcriptional regulator
L3_083_088G1_scaffold_8_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29225..30130
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Tagatose-6-phosphate kinase n=6 Tax=Clostridium clostridioforme RepID=N9VZV9_9CLOT
1-phosphofructokinase
L3_083_088G1_scaffold_8_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30145..32073
DNA (1929bp) protein (643aa)
PTS system, Fru family, IIC component n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZKK8_9CLOT
PTS system, Fru family, IIC component {ECO:0000313|EMBL:ENZ40360.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
PTS system fructose subfamily transporter subunit IIC
L3_083_088G1_scaffold_8_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32199..32777
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99750.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
transcriptional regulator
L3_083_088G1_scaffold_8_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32926..33552
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3C9_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG54143.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
TetR family transcriptional regulator
L3_083_088G1_scaffold_8_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33572..34633
DNA (1062bp) protein (354aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3C8_9CLOT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEG54142.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
RND family efflux transporter, MFP subunit
L3_083_088G1_scaffold_8_29
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34639..37683
DNA (3045bp) protein (1015aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99747.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Cation/multidrug efflux pump
L3_083_088G1_scaffold_8_30
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38305..39231
DNA (927bp) protein (309aa)
Putative lipid kinase YtlR {ECO:0000313|EMBL:KJJ66822.1}; EC=2.7.1.- {ECO:0000313|EMBL:KJJ66822.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPD2_9CLOT
diacylglycerol kinase catalytic subunit
Displaying items 1-30 of 190 in total

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