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L3_083_088G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_50_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

220..1200
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43989.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_088G1_scaffold_50_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1360..2352
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43987.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative surface layer protein
L3_083_088G1_scaffold_50_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3207..3584)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DCK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57340.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_088G1_scaffold_50_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3645..4163)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPH8_9FIRM
TIGR04002 family protein {ECO:0000313|EMBL:EHO35083.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_088G1_scaffold_50_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4318..4713
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35084.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4758..5165)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35085.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Uncharacterized protein, possibly involved in aromatic compounds catabolism
L3_083_088G1_scaffold_50_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5149..6072)
DNA (924bp) protein (308aa)
SufB/sufD domain protein n=3 Tax=Clostridiales RepID=G9YPH5_9FIRM
SufB/sufD domain protein {ECO:0000313|EMBL:ERI77235.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_083_088G1_scaffold_50_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6075..6812)
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridiales RepID=G9YPH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35087.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative iron-sulfur cluster assembly protein
L3_083_088G1_scaffold_50_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6956..7600
DNA (645bp) protein (215aa)
Rubrerythrin n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPH3_9FIRM
Rubrerythrin {ECO:0000313|EMBL:EHM52569.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_088G1_scaffold_50_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7646..9025)
DNA (1380bp) protein (460aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57347.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative penicillin-binding protein A
L3_083_088G1_scaffold_50_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9012..10802)
DNA (1791bp) protein (597aa)
FHA domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPG8_9FIRM
FHA domain protein {ECO:0000313|EMBL:EHM52700.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_083_088G1_scaffold_50_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10962..11558
DNA (597bp) protein (199aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D793_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:ERI77342.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_083_088G1_scaffold_50_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11558..11821
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35092.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11837..12076)
DNA (240bp) protein (80aa)
Phage shock protein G family protein n=3 Tax=Clostridiales RepID=G9YPG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35093.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12568..13203
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35094.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13330..17025)
DNA (3696bp) protein (1232aa)
putative phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8R8_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EHO35095.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17042..17782)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35096.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative ABC transporter substrate-binding protein
L3_083_088G1_scaffold_50_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17880..18545)
DNA (666bp) protein (222aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BRS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57355.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative ABC transporter substrate-binding protein
L3_083_088G1_scaffold_50_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18976..19788)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8S0_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_088G1_scaffold_50_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19999..22749)
DNA (2751bp) protein (917aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHA9_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
secA; preprotein translocase SecA subunit
L3_083_088G1_scaffold_50_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23098..23919
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54995.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
serine protease
L3_083_088G1_scaffold_50_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23912..25264
DNA (1353bp) protein (451aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8S3_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EHO35100.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_088G1_scaffold_50_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25269..26438
DNA (1170bp) protein (390aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8T7_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EHO35114.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_083_088G1_scaffold_50_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26520..26933)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57268.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dehydratase
L3_083_088G1_scaffold_50_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26915..28531)
DNA (1617bp) protein (539aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Acetate CoA-transferase YdiF n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YL38_9FIRM
coenzyme A transferase
L3_083_088G1_scaffold_50_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28659..29984)
DNA (1326bp) protein (442aa)
Citrate transporter n=2 Tax=Clostridiales RepID=U2BL93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35117.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
H+/gluconate symporter and related permeases
L3_083_088G1_scaffold_50_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30138..31472)
DNA (1335bp) protein (445aa)
Putative 4-hydroxybutyrate coenzyme A transferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C329_9CLOT
Putative 4-hydroxybutyrate coenzyme A transferase {ECO:0000313|EMBL:ERI78915.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Acetyl-CoA hydrolase
L3_083_088G1_scaffold_50_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31936..32811
DNA (876bp) protein (292aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=U2DBS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35119.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulator
L3_083_088G1_scaffold_50_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33121..33990
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35120.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Dak phosphatase
L3_083_088G1_scaffold_50_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34065..35135
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35121.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 110 in total

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