ggKbase home page

L3_083_088G1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_128_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..764)
DNA (762bp) protein (254aa)
Sc protein ( SvMrprotein ) n=2 Tax=Escherichia coli RepID=Q47429_ECOLX
putative side tail fiber protein from lambdoid prophage
Uncharacterized protein {ECO:0000313|EMBL:ETY36545.1}; Flags: Fragment;; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L3_083_088G1_scaffold_128_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(776..1210)
DNA (435bp) protein (145aa)
R n=27 Tax=Enterobacteriaceae RepID=Q47426_ECOLX
putative tail fiber structure or assembly
Uncharacterized protein {ECO:0000313|EMBL:ESA72671.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
L3_083_088G1_scaffold_128_3
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1289..2125)
DNA (837bp) protein (279aa)
Protein 16 protein n=24 Tax=Enterobacteriaceae RepID=F4SY24_ECOLX
putative tail tube protein
Uncharacterized protein {ECO:0000313|EMBL:EOU40720.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_083_088G1_scaffold_128_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2125..3558)
DNA (1434bp) protein (478aa)
BplA n=3 Tax=Escherichia coli RepID=G1YN25_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGB64570.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
putative baseplate structural protein
L3_083_088G1_scaffold_128_5
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..3911)
DNA (357bp) protein (119aa)
PmgA n=64 Tax=root RepID=Q71TD1_BPP1
putative morphogenetic protein
Uncharacterized protein {ECO:0000313|EMBL:EOU40722.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_083_088G1_scaffold_128_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3911..7285)
DNA (3375bp) protein (1125aa)
Putative structural injection transglycosylase n=2 Tax=Escherichia coli RepID=M5HLJ8_ECOLX
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EMU70577.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
putative structural injection transglycosylase
L3_083_088G1_scaffold_128_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..8248)
DNA (882bp) protein (294aa)
PmgB n=13 Tax=Enterobacteriaceae RepID=H5J4T9_ECOLX
Putative pmgB {ECO:0000313|EMBL:EMX31438.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
putative morphogenetic protein
L3_083_088G1_scaffold_128_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8263..8874)
DNA (612bp) protein (204aa)
Major tail tube protein n=45 Tax=Enterobacteriaceae RepID=H6MM99_ECOLX
major tail tube protein
Major tail tube protein {ECO:0000313|EMBL:EZE16552.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_083_088G1_scaffold_128_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8885..9451)
DNA (567bp) protein (189aa)
Phage morphogenetic protein TubA n=16 Tax=Escherichia coli RepID=G0FH41_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI18577.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
putative morphogenetic protein
L3_083_088G1_scaffold_128_10
unknown

Not on your lists

comp(9536..9661)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_083_088G1_scaffold_128_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9606..10790)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V4FJB4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EIH77780.1}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
bacterial SH3 domain protein
L3_083_088G1_scaffold_128_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10777..11283)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 108 (4-6924867) RepID=V4E2X6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHX24962.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
hypothetical protein
L3_083_088G1_scaffold_128_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11372..11863)
DNA (492bp) protein (164aa)
SimA domain protein n=3 Tax=Escherichia coli RepID=K3GP51_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESP06092.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
hypothetical protein
L3_083_088G1_scaffold_128_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12291..12512
DNA (222bp) protein (74aa)
Icd n=3 Tax=Escherichia coli RepID=L8BVV1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA63881.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
reversible cell division inhibition protein
L3_083_088G1_scaffold_128_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12509..13552
DNA (1044bp) protein (348aa)
Ant1 n=4 Tax=Escherichia coli RepID=K3FXJ9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESP06090.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
putative antirepressor
L3_083_088G1_scaffold_128_16
Escherichia phage RCS47, Punalikevirus, Caudovirales, Viruses

Not on your lists

13717..14517
DNA (801bp) protein (267aa)
KilA-N domain protein n=2 Tax=Escherichia coli RepID=H4Z678_ECOLX
Protein kilA {ECO:0000313|EMBL:CDN90798.1}; TaxID=1590550 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Punalikevirus.;" source="Escherichia phage RCS47.;"
putative host killing protein
L3_083_088G1_scaffold_128_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14583..15392
DNA (810bp) protein (270aa)
RepL n=8 Tax=root RepID=Q1MVK3_BPP7
Putative replication protein repL {ECO:0000313|EMBL:EMU61621.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
putative lytic replication protein
L3_083_088G1_scaffold_128_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15443..15688
DNA (246bp) protein (82aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=H6MMA7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEK08862.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L3_083_088G1_scaffold_128_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15812..16018
DNA (207bp) protein (69aa)
Protein hokD n=1 Tax=Escherichia coli KTE75 RepID=L3Q4Y6_ECOLX
Protein hokD {ECO:0000313|EMBL:ELE54612.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_083_088G1_scaffold_128_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16141..16650)
DNA (510bp) protein (170aa)
BplB n=10 Tax=Escherichia coli RepID=H4UEE6_ECOLX
BplB {ECO:0000313|EMBL:EHV63711.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
putative baseplate protein
L3_083_088G1_scaffold_128_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16662..17243)
DNA (582bp) protein (194aa)
Phage morphogenetic protein PmgG n=27 Tax=Enterobacteriaceae RepID=G0FH48_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGB64555.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
putative morphogenetic protein
L3_083_088G1_scaffold_128_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17279..18094)
DNA (816bp) protein (272aa)
Phage tail tube protein n=15 Tax=Escherichia coli RepID=G0FH49_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHV63708.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
tail tube protein
L3_083_088G1_scaffold_128_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..19693)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=H5J4V4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA75609.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
tail sheath protein
L3_083_088G1_scaffold_128_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19754..21460)
DNA (1707bp) protein (569aa)
Gp23 n=46 Tax=root RepID=Q71TB1_BPP1
major capsid protein
Uncharacterized protein {ECO:0000313|EMBL:ESA68686.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_083_088G1_scaffold_128_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21685..22686)
DNA (1002bp) protein (334aa)
ParB n=73 Tax=root RepID=Q38420_BPP1
plasmid partition protein B
ParB {ECO:0000313|EMBL:EHU11808.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L3_083_088G1_scaffold_128_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22703..23899)
DNA (1197bp) protein (399aa)
Plasmid partition protein A n=80 Tax=Enterobacteriaceae RepID=C8UR51_ECO1A
plasmid partition protein A
Plasmid partition protein A {ECO:0000313|EMBL:EOV48096.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_083_088G1_scaffold_128_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24068..24877)
DNA (810bp) protein (270aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=I4T1G3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDL28082.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
hypothetical protein
L3_083_088G1_scaffold_128_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25170..26054)
DNA (885bp) protein (295aa)
Initiator Replication protein n=34 Tax=Enterobacteriaceae RepID=E9WNS1_ECOLX
putative replication protein
Putative RepFIB replication protein A {ECO:0000313|EMBL:ESA68682.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_083_088G1_scaffold_128_29
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26390..26782)
DNA (393bp) protein (131aa)
UpfA n=1 Tax=Escherichia coli IS5 RepID=V6ENL4_ECOLX
Uncharacterised protein {ECO:0000313|EMBL:CQV90540.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
hypothetical protein
L3_083_088G1_scaffold_128_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26960..27382)
DNA (423bp) protein (141aa)
PpfA n=10 Tax=root RepID=Q71TA5_BPP1
Uncharacterized protein {ECO:0000313|EMBL:ETY36573.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
putative periplasmic function protein
Displaying items 1-30 of 82 in total

View Taxonomy