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L3_083_088G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_137_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(169..909)
DNA (741bp) protein (247aa)
Membrane MotB of proton-channel complex MotA/MotB family protein n=41 Tax=Clostridium difficile RepID=T3I7X0_CLODC
putative OmpA/MotB proton channel
Putative OmpA/MotB proton channel {ECO:0000313|EMBL:CAJ67579.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_083_088G1_scaffold_137_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(930..1718)
DNA (789bp) protein (263aa)
MotA/TolQ/ExbB proton channel family protein n=86 Tax=Clostridium difficile RepID=T2UC95_CLODI
Putative MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCL20865.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative MotA/TolQ/ExbB proton channel
L3_083_088G1_scaffold_137_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2155..2919
DNA (765bp) protein (255aa)
DeoR-family transcriptional regulator n=177 Tax=Clostridium difficile RepID=C9XLX1_CLODC
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCL32839.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_083_088G1_scaffold_137_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3200..4315)
DNA (1116bp) protein (372aa)
Ethanolamine utilization , EutH family protein n=126 Tax=Clostridium difficile RepID=T2UDK0_CLODI
ethanolamine transporter
Ethanolamine utilization , EutH family protein {ECO:0000313|EMBL:EQE68744.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_088G1_scaffold_137_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4356..5882)
DNA (1527bp) protein (509aa)
glpK1; Glycerol kinase (GK) (EC:2.7.1.30)
Glycerol kinase (GK) {ECO:0000313|EMBL:CAJ67575.1}; EC=2.7.1.30 {ECO:0000313|EMBL:CAJ67575.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Glycerol kinase n=123 Tax=Clostridium difficile RepID=T3I652_CLODC
L3_083_088G1_scaffold_137_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6175..7272
DNA (1098bp) protein (366aa)
Aminotransferase class-V family protein n=106 Tax=Clostridium difficile RepID=T2UCR8_CLODI
Putative pyridoxal phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCL20861.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative pyridoxal phosphate-dependentaminotransferase
L3_083_088G1_scaffold_137_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7874..8386)
DNA (513bp) protein (171aa)
Uncharacterized protein n=110 Tax=Clostridium difficile RepID=G6BUE3_CLODI
putative exported protein
Putative exported protein {ECO:0000313|EMBL:EQG77523.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_137_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8938..9819
DNA (882bp) protein (294aa)
Uncharacterized protein n=21 Tax=Clostridium difficile RepID=G6BUE2_CLODI
Putative exported protein {ECO:0000313|EMBL:CDT32143.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84563.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative exported protein
L3_083_088G1_scaffold_137_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10131..10910)
DNA (780bp) protein (260aa)
hisK; histidinol-phosphatase (EC:3.1.3.15)
Histidinol-phosphatase (HolPase) {ECO:0000313|EMBL:CCL32833.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CCL32833.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Histidinol-phosphatase n=80 Tax=Clostridium difficile RepID=T3I5C8_CLODC
L3_083_088G1_scaffold_137_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11456..11806)
DNA (351bp) protein (117aa)
Uncharacterized protein n=200 Tax=Clostridium difficile RepID=C9XLW3_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ31232.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_083_088G1_scaffold_137_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11822..12238)
DNA (417bp) protein (139aa)
Uncharacterized protein n=216 Tax=Clostridium difficile RepID=C9XLW2_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG78015.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_137_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12257..12448)
DNA (192bp) protein (64aa)
Uncharacterized protein n=219 Tax=Clostridium difficile RepID=C9YJB2_CLODR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL00638.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_083_088G1_scaffold_137_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13414)
DNA (816bp) protein (272aa)
Octanoyltransferase LipM {ECO:0000256|HAMAP-Rule:MF_02118}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_02118};; Octanoyl-[acyl-carrier-protein]:[GcvH] N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_02118}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Octanoyltransferase LipM n=176 Tax=Clostridium difficile RepID=LIPM_CLOD6
putative biotin/lipoate-protein ligase
L3_083_088G1_scaffold_137_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13461..14399)
DNA (939bp) protein (313aa)
Putative radical SAM superfamily protein n=1 Tax=Clostridium difficile E7 RepID=U4AZD0_CLODI
Radical SAM superfamily protein {ECO:0000313|EMBL:EQG77345.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative radical SAM superfamily protein
L3_083_088G1_scaffold_137_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14396..15268)
DNA (873bp) protein (291aa)
Biotin and Thiamin Synthesis associated domain protein n=141 Tax=Clostridium difficile RepID=T3I6I1_CLODC
putative radical SAM superfamily protein
Biotin and Thiamin Synthesis associated domain protein {ECO:0000313|EMBL:EQE68710.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_088G1_scaffold_137_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15293..17221)
DNA (1929bp) protein (643aa)
2Fe-2S iron-sulfur cluster binding domain protein n=114 Tax=Clostridium difficile RepID=T3I876_CLODC
putative iron-sulfur protein
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EQE68714.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_088G1_scaffold_137_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17333..17710)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=208 Tax=Clostridium difficile RepID=GCSH_CLOD6
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_083_088G1_scaffold_137_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17797..19923)
DNA (2127bp) protein (709aa)
CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit {ECO:0000313|EMBL:EQI92163.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EQI92163.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit n=185 Tax=Clostridium difficile RepID=C9XLV5_CLODC
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
L3_083_088G1_scaffold_137_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19980..20786)
DNA (807bp) protein (269aa)
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase n=219 Tax=Clostridium difficile RepID=C9XLV4_CLODC
carbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase {ECO:0000313|EMBL:EQG77493.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_137_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20836..22203)
DNA (1368bp) protein (456aa)
Carbon monoxide dehydrogenase corrinoid/iron-sulfur protein, gamma subunit n=2 Tax=Clostridium difficile RepID=T4PQB3_CLODI
acetyl-CoA decarbonylase/synthase complex subunit gamma
Acetyl-CoA decarbonylase/synthase complex subunit gamma {ECO:0000313|EMBL:CKH61189.1}; Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase, delta subunit {ECO:0000313|EMBL:CDS84091.1}; Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, delta subunit {ECO:0000313|EMBL:CEJ97273.1}; Putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit {ECO:0000313|EMBL:CDS84540.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_083_088G1_scaffold_137_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22234..23178)
DNA (945bp) protein (315aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit n=204 Tax=Clostridium difficile RepID=C9XLV2_CLODC
acetyl-CoA decarbonylase/synthase complex subunit delta
Putative corrinoid/iron-sulfur protein small subunit {ECO:0000313|EMBL:EHJ31243.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_083_088G1_scaffold_137_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23198..23968)
DNA (771bp) protein (257aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=217 Tax=Clostridium difficile RepID=C9XLV1_CLODC
carbon monoxide dehydrogenase/acetyl-CoA synthase complex, nickel-inserting subunit
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQG77310.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_137_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24024..25409)
DNA (1386bp) protein (462aa)
Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, dihydrolipoyldehydrogenase subunit (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Dihydrolipoyl dehydrogenase n=176 Tax=Clostridium difficile RepID=T3IAA1_CLODC
L3_083_088G1_scaffold_137_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25453..26334)
DNA (882bp) protein (294aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Methylenetetrahydrofolate reductase n=175 Tax=Clostridium difficile RepID=T3I5A9_CLODC
L3_083_088G1_scaffold_137_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26370..27044)
DNA (675bp) protein (225aa)
Methylene-tetrahydrofolate reductase family protein n=191 Tax=Clostridium difficile RepID=C9XLU8_CLODC
hypothetical protein
Methylene-tetrahydrofolate reductase family protein {ECO:0000313|EMBL:EQE68739.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_088G1_scaffold_137_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27081..27953)
DNA (873bp) protein (291aa)
Bifunctional protein FolD n=125 Tax=Clostridium difficile RepID=T2TPA8_CLODI
folD; FolD bifunctional protein
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_083_088G1_scaffold_137_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28045..28677)
DNA (633bp) protein (211aa)
fchA; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Methenyltetrahydrofolate cyclohydrolase (5,10-methenyltetrahydrofolate 5-hydrolase) {ECO:0000313|EMBL:CCL20841.1}; EC=3.5.4.9 {ECO:0000313|EMBL:CCL20841.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Methenyltetrahydrofolate cyclohydrolase n=178 Tax=Clostridium difficile RepID=T3IBE8_CLODC
L3_083_088G1_scaffold_137_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28782..30458)
DNA (1677bp) protein (559aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Formate--tetrahydrofolate ligase n=194 Tax=Clostridium difficile RepID=FTHS_CLOD6
fhs; formate--tetrahydrofolate ligase
L3_083_088G1_scaffold_137_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30707..31486)
DNA (780bp) protein (260aa)
Putative carbon monoxide dehydrogenase accessory protein CooC n=3 Tax=Clostridium difficile RepID=G6B7B2_CLODI
cooC; carbon monoxide dehydrogenase accessory protein
Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase, accessory protein {ECO:0000313|EMBL:CCK89505.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L3_083_088G1_scaffold_137_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31806..33725)
DNA (1920bp) protein (640aa)
cooS; bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (EC:1.2.99.2)
Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH) {ECO:0000313|EMBL:CCL20837.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CCL20837.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Carbon-monoxide dehydrogenase, catalytic subunit n=101 Tax=Clostridium difficile RepID=T3I860_CLODC
Displaying items 1-30 of 51 in total

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