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L3_083_088G1_scaffold_152

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_152_1
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCF2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20376.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_083_088G1_scaffold_152_2
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(365..574)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WPS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05413.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
4Fe-4S ferredoxin
L3_083_088G1_scaffold_152_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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761..1252
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61119.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
RNA polymerase, sigma subunit, SigV
L3_083_088G1_scaffold_152_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1249..2112
DNA (864bp) protein (288aa)
Tat pathway signal sequence domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG11_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEQ57146.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Protein of unknown function (DUF3298).
L3_083_088G1_scaffold_152_5
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2137..2652
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CD50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12386.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_088G1_scaffold_152_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2659..3111)
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z6R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23430.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_083_088G1_scaffold_152_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3134..4981)
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPW3_9CLOT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJJ72541.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATP-binding cassette subfamily B protein
L3_083_088G1_scaffold_152_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4981..6705)
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPW2_9CLOT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJJ72540.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ABC transporter
L3_083_088G1_scaffold_152_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7182..8138
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1J0_9CLOT
L3_083_088G1_scaffold_152_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8152..8895
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=3 Tax=Clostridium bolteae RepID=A8S0V8_9CLOT
L3_083_088G1_scaffold_152_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8895..10049
DNA (1155bp) protein (385aa)
Cysteine desulfurase IscS {ECO:0000313|EMBL:KJJ72535.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJJ72535.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
cysteine desulfurase (EC:2.8.1.7)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPV7_9CLOT
L3_083_088G1_scaffold_152_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10088..11278
DNA (1191bp) protein (397aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Probable tRNA sulfurtransferase n=6 Tax=Clostridium RepID=A8S0V6_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L3_083_088G1_scaffold_152_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11316..11549)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57776.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
PTS system phosphocarrier protein HPr
L3_083_088G1_scaffold_152_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11686..13044
DNA (1359bp) protein (453aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42905.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_088G1_scaffold_152_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13292..13567
DNA (276bp) protein (92aa)
UPF0297 protein HMPREF9469_04615 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPV3_9CLOT
UPF0297 protein HMPREF9469_04615 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_083_088G1_scaffold_152_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13912..14352
DNA (441bp) protein (147aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL91_9CLOT
conserved hypothetical protein TIGR00250
L3_083_088G1_scaffold_152_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14356..14637
DNA (282bp) protein (94aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8S0V0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16446.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_083_088G1_scaffold_152_18
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14649..16628
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KR69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64612.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
RNA-metabolising metallo-beta-lactamase
L3_083_088G1_scaffold_152_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16671..17291
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57770.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
aminodeoxychorismate lyase
L3_083_088G1_scaffold_152_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17288..17953
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96528.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Predicted O-methyltransferase
L3_083_088G1_scaffold_152_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17965..19197
DNA (1233bp) protein (411aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42916.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_088G1_scaffold_152_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19230..20063
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96526.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_083_088G1_scaffold_152_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20133..23078
DNA (2946bp) protein (982aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EEQ57766.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEQ57766.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Peptidase M16 inactive domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHT1_9FIRM
Peptidase M16C associated domain-containing protein
L3_083_088G1_scaffold_152_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23094..24005
DNA (912bp) protein (304aa)
GTPase Era n=4 Tax=Clostridium RepID=N9YWN7_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
GTP-binding protein Era
L3_083_088G1_scaffold_152_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24034..24684
DNA (651bp) protein (217aa)
DNA repair protein RecO n=5 Tax=Clostridium RepID=N9Z7H4_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
DNA repair protein RecO
L3_083_088G1_scaffold_152_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24778..25434
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57763.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_083_088G1_scaffold_152_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25579..26967
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1W2_9CLOT
L3_083_088G1_scaffold_152_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27355..28869
DNA (1515bp) protein (505aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K0H6_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_083_088G1_scaffold_152_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28847..29536
DNA (690bp) protein (230aa)
Transcriptional regulatory protein ResD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHS1_9FIRM
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EEQ57756.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
winged helix family two component transcriptional regulator
L3_083_088G1_scaffold_152_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29964..32591
DNA (2628bp) protein (876aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1M5_9CLOT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCY42931.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 61 in total

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