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L3_083_088G1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_179_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

606..860
DNA (255bp) protein (85aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQL3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB88112.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative transcriptional regulator
L3_083_088G1_scaffold_179_2
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(885..1094)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SX81_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY56941.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_083_088G1_scaffold_179_3
unknown

Not on your lists

1267..1494
DNA (228bp) protein (76aa)

This feature has no annotations

L3_083_088G1_scaffold_179_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1544..2002
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q4S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57785.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_083_088G1_scaffold_179_5
unknown

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2061..2441
DNA (381bp) protein (127aa)

This feature has no annotations

L3_083_088G1_scaffold_179_6
unknown

Not on your lists

2458..2667
DNA (210bp) protein (70aa)

This feature has no annotations

L3_083_088G1_scaffold_179_7
unknown

Not on your lists

2675..2929
DNA (255bp) protein (85aa)

This feature has no annotations

L3_083_088G1_scaffold_179_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

2946..3404
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88103.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_083_088G1_scaffold_179_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3541..3753
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28380.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_083_088G1_scaffold_179_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3759..4079
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P634_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13191.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_083_088G1_scaffold_179_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4220..4537)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YN76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23866.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_088G1_scaffold_179_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4540..4812)
DNA (273bp) protein (91aa)
Holin, phage phi LC3 family n=3 Tax=Clostridiales RepID=G9YN75_9FIRM
Phage phi LC3 family holin {ECO:0000313|EMBL:EHO23867.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
holin, phage phi LC3 family
L3_083_088G1_scaffold_179_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4831..6312)
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CL23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52697.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_088G1_scaffold_179_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6305..6667)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52696.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_088G1_scaffold_179_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6708..6863)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52695.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_088G1_scaffold_179_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6877..7104)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF56043.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_088G1_scaffold_179_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7115..8494)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L0R7_EXISA
Uncharacterized protein {ECO:0000313|EMBL:KGF56042.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_088G1_scaffold_179_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8510..9568)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H750_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGF52692.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_083_088G1_scaffold_179_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9591..10526)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52691.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_088G1_scaffold_179_20
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10523..11254)
DNA (732bp) protein (244aa)
Phage tail protein I n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9L732_9FIRM
Phage tail protein I {ECO:0000313|EMBL:EOS54211.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
tail protein
L3_083_088G1_scaffold_179_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11247..12383)
DNA (1137bp) protein (379aa)
Baseplate J-like protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P625_9FIRM
Baseplate J-like protein {ECO:0000313|EMBL:EDS13182.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
baseplate J family protein
L3_083_088G1_scaffold_179_22
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12376..12693)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9L6L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS54213.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
GPW/gp25 family protein
L3_083_088G1_scaffold_179_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12704..13096)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P623_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13180.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
P2 GpU family protein
L3_083_088G1_scaffold_179_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13097..13423)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P622_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13179.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_083_088G1_scaffold_179_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13423..14751)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P621_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13178.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_083_088G1_scaffold_179_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14748..14957)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P620_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13177.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
phage Tail Protein X
L3_083_088G1_scaffold_179_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(14954..18508)
DNA (3555bp) protein (1185aa)
Phage tail tape measure protein TP901 family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LX22_9FIRM
Phage tail tape measure protein TP901 family {ECO:0000313|EMBL:CDB88259.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_083_088G1_scaffold_179_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18736..19191)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2M8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97771.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_088G1_scaffold_179_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19246..19764)
DNA (519bp) protein (173aa)
Phage tail tube protein FII n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2M9_9FIRM
Phage tail tube protein FII
Phage tail tube protein FII {ECO:0000313|EMBL:CBK97772.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_083_088G1_scaffold_179_30
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(19780..21204)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M1F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88256.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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