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L3_083_088G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_239_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroidales RepID=A6LD75_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI08906.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_088G1_scaffold_239_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(365..1219)
DNA (855bp) protein (285aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LD74_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ83923.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_088G1_scaffold_239_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1241..2755)
DNA (1515bp) protein (505aa)
Tat pathway signal sequence domain protein n=9 Tax=Bacteroidales RepID=C7XCT5_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFK63134.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
dehydrogenase
L3_083_088G1_scaffold_239_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2784..4052)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XCT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83925.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
secreted glycosylhydrolase
L3_083_088G1_scaffold_239_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4415..4672
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=K5ZLY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27937.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_088G1_scaffold_239_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4747..6258)
DNA (1512bp) protein (504aa)
YjeF domain protein n=7 Tax=Bacteroidales RepID=C7XCT7_9PORP
sugar kinase
YjeF-related family protein {ECO:0000313|EMBL:KDS62993.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_088G1_scaffold_239_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6313..6918
DNA (606bp) protein (202aa)
Hypoxanthine phosphoribosyltransferase n=5 Tax=Bacteroidales RepID=A6LD70_PARD8
hypoxanthine phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ABR43634.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_088G1_scaffold_239_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6955..7527
DNA (573bp) protein (191aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Adenylate kinase n=9 Tax=Bacteroidales RepID=KAD_PARD8
L3_083_088G1_scaffold_239_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7543..8703
DNA (1161bp) protein (387aa)
GTPase Obg n=4 Tax=Bacteroidales RepID=OBG_PARD8
obgE; GTPase ObgE
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_083_088G1_scaffold_239_10
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8675..9502
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6APB2_9PORP
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_088G1_scaffold_239_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9530..10219
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B201_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29850.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_088G1_scaffold_239_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10342..10542
DNA (201bp) protein (67aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LD65_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63126.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_088G1_scaffold_239_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10693..10986
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LD64_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS63010.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_088G1_scaffold_239_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10992..11282
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LD63_PARD8
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_088G1_scaffold_239_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11390..12928
DNA (1539bp) protein (513aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Ribonuclease Y n=8 Tax=Bacteroidales RepID=RNY_PARD8
phosphodiesterase
L3_083_088G1_scaffold_239_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12991..14859)
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ANL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83937.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
sulfatase
L3_083_088G1_scaffold_239_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14856..16472)
DNA (1617bp) protein (539aa)
ABC transporter, ATP-binding protein n=5 Tax=Bacteroidales RepID=C7XCU8_9PORP
ABC transporter family protein {ECO:0000313|EMBL:KDS50045.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
ABC transporter ATP-binding protein
L3_083_088G1_scaffold_239_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16546..17391)
DNA (846bp) protein (282aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LD59_PARD8
DNA repair ATPase
Uncharacterized protein {ECO:0000313|EMBL:EEU50649.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_088G1_scaffold_239_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17586..17882
DNA (297bp) protein (99aa)
Nucleotidyltransferase domain protein n=9 Tax=Bacteroidales RepID=C7XCV0_9PORP
nucleotidyltransferase
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEU50650.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_088G1_scaffold_239_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19009..20532
DNA (1524bp) protein (508aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISJ8_9BACE
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_088G1_scaffold_239_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20544..21563
DNA (1020bp) protein (340aa)
Rod shape-determining protein MreB n=8 Tax=Bacteroidales RepID=A6LD55_PARD8
rod shape-determining protein MreB
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EKN25200.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_083_088G1_scaffold_239_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21666..22520
DNA (855bp) protein (285aa)
Cell shape-determining protein MreC n=6 Tax=Bacteroidales RepID=A6LD54_PARD8
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_088G1_scaffold_239_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22513..23031
DNA (519bp) protein (173aa)
Rod shape-determining protein MreD n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISK1_9BACE
Rod shape-determining protein MreD {ECO:0000313|EMBL:EFI08928.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_088G1_scaffold_239_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23021..24889
DNA (1869bp) protein (623aa)
Penicillin-binding protein 2 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISK2_9BACE
Penicillin-binding protein 2 {ECO:0000313|EMBL:EFI08929.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
penicillin-binding protein 2
L3_083_088G1_scaffold_239_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24879..26324
DNA (1446bp) protein (482aa)
Rod shape-determining protein RodA n=3 Tax=Parabacteroides RepID=A6LD51_PARD8
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:EKN29864.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_088G1_scaffold_239_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26777..28258)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LD49_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN29865.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_088G1_scaffold_239_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28466..29653)
DNA (1188bp) protein (396aa)
8-amino-7-oxononanoate synthase n=10 Tax=Bacteroidales RepID=A6LD48_PARD8
8-amino-7-oxononanoate synthase
Putative 8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EEU50661.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_088G1_scaffold_239_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29852..30823
DNA (972bp) protein (324aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EFK63107.1}; EC=2.7.1.- {ECO:0000313|EMBL:EFK63107.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LD47_PARD8
hypothetical protein
L3_083_088G1_scaffold_239_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30808..31521)
DNA (714bp) protein (238aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=3 Tax=Parabacteroides distasonis RepID=TRMN6_PARD8
hypothetical protein
L3_083_088G1_scaffold_239_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31610..34081
DNA (2472bp) protein (824aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Lon protease n=2 Tax=Parabacteroides distasonis RepID=LON_PARD8
ATP-dependent protease
Displaying items 1-30 of 64 in total

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