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L3_083_088G1_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_263_1
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(240..1379)
DNA (1140bp) protein (380aa)
Phage integrase family site specific recombinase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GF76_EUBLK
phage integrase family site specific recombinase
Phage integrase family site specific recombinase {ECO:0000313|EMBL:ADO38210.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_2
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1532..2905)
DNA (1374bp) protein (458aa)
Phage protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LI97_ACEWD
phage protein
Phage protein {ECO:0000313|EMBL:AFA47271.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_083_088G1_scaffold_263_3
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2965..3828)
DNA (864bp) protein (288aa)
Bifunctional S24 family peptidase/transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PXG9_9FIRM
Bifunctional S24 family peptidase/transcriptional regulator {ECO:0000313|EMBL:CCZ20918.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
phage repressor
L3_083_088G1_scaffold_263_4
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3970..4209
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EWQ8_CLOTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI49143.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_083_088G1_scaffold_263_5
unknown

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4212..4373
DNA (162bp) protein (54aa)

This feature has no annotations

L3_083_088G1_scaffold_263_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4370..4855)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LIW4_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA49853.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_083_088G1_scaffold_263_7
unknown

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comp(4839..5315)
DNA (477bp) protein (159aa)

This feature has no annotations

L3_083_088G1_scaffold_263_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5545..5754
DNA (210bp) protein (70aa)
Excision promoter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GF68_EUBLK
excision promoter
Excision promoter {ECO:0000313|EMBL:ADO38202.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_9
unknown

Not on your lists

5983..6303
DNA (321bp) protein (107aa)

This feature has no annotations

L3_083_088G1_scaffold_263_10
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6805..7062
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL15_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36257.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_11
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7049..7561
DNA (513bp) protein (171aa)
Siphovirus family protein n=2 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL16_EUBLK
siphovirus family protein
Siphovirus family protein {ECO:0000313|EMBL:ADO36258.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_12
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7570..8211
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL17_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36259.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8212..8814
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KVP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34268.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_083_088G1_scaffold_263_14
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8854..9576
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XBV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19446.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
hypothetical protein
L3_083_088G1_scaffold_263_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9573..10412
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31485.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_088G1_scaffold_263_16
unknown

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10415..10669
DNA (255bp) protein (85aa)

This feature has no annotations

L3_083_088G1_scaffold_263_17
unknown

Not on your lists

10666..10995
DNA (330bp) protein (110aa)

This feature has no annotations

L3_083_088G1_scaffold_263_18

Not on your lists

10955..11311
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SDX7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC58972.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_083_088G1_scaffold_263_19
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11304..11804
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL24_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36266.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11809..12606
DNA (798bp) protein (266aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
DNA methylase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKD7_9FIRM
DNA methylase
L3_083_088G1_scaffold_263_21
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12609..13013
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL25_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36267.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_22
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

13013..13363
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90575.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
L3_083_088G1_scaffold_263_23
unknown

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13360..13590
DNA (231bp) protein (77aa)

This feature has no annotations

L3_083_088G1_scaffold_263_24
unknown

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13587..13772
DNA (186bp) protein (62aa)

This feature has no annotations

L3_083_088G1_scaffold_263_25
unknown

Not on your lists

13777..13974
DNA (198bp) protein (66aa)

This feature has no annotations

L3_083_088G1_scaffold_263_26
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13974..14384
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL28_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36270.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14368..14556
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8R6_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EDS78067.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
L3_083_088G1_scaffold_263_28
unknown

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14553..14720
DNA (168bp) protein (56aa)

This feature has no annotations

L3_083_088G1_scaffold_263_29
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14717..15073
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL30_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36272.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_083_088G1_scaffold_263_30
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15060..15281
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72115.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Displaying items 1-30 of 62 in total

View Taxonomy