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L3_083_088G1_scaffold_288

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_288_1
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349..1974)
DNA (1626bp) protein (542aa)
2-isopropylmalate synthase/homocitrate synthase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA11_BILWA
2-isopropylmalate synthase/homocitrate synthase {ECO:0000313|EMBL:EFV43172.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
2-isopropylmalate synthase
L3_083_088G1_scaffold_288_2
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1993..3330)
DNA (1338bp) protein (446aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Amidophosphoribosyltransferase n=2 Tax=Bilophila RepID=E5YA10_BILWA
purF; amidophosphoribosyltransferase
L3_083_088G1_scaffold_288_3
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3861..7100)
DNA (3240bp) protein (1080aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Carbamoyl-phosphate synthase large chain n=2 Tax=Bilophila RepID=E5YA09_BILWA
carbamoyl-phosphate synthase large subunit
L3_083_088G1_scaffold_288_4
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7464..7685
DNA (222bp) protein (74aa)
50S ribosomal protein L28 n=2 Tax=Bilophila RepID=E5YA08_BILWA
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rpmB; 50S ribosomal protein L28
L3_083_088G1_scaffold_288_5
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8835
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA07_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43168.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rhomboid family protein
L3_083_088G1_scaffold_288_6
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8779..10017)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA06_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43167.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
O-antigen polymerase
L3_083_088G1_scaffold_288_7
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10082..11140)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA05_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43166.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
group 1 glycosyl transferase
L3_083_088G1_scaffold_288_8
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11150..12241)
DNA (1092bp) protein (364aa)
Xaa-Pro aminopeptidase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA04_BILWA
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EFV43165.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
peptidase M24
L3_083_088G1_scaffold_288_9
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12272..12409)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=S2KSZ4_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EPC05840.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_10
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..13461)
DNA (1056bp) protein (352aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA03_BILWA
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFV43164.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_11
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13578..14852
DNA (1275bp) protein (425aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA02_BILWA
L3_083_088G1_scaffold_288_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14868..16127
DNA (1260bp) protein (420aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
Dihydroorotase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA01_BILWA
pyrC; dihydroorotase-like protein
L3_083_088G1_scaffold_288_13
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16499..17269)
DNA (771bp) protein (257aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YA00_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43175.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17411..18787
DNA (1377bp) protein (459aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y9Z9_BILWA
MiaB family RNA modification protein
L3_083_088G1_scaffold_288_15
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18810..19493
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y9Z8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43173.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
L3_083_088G1_scaffold_288_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19821..20711)
DNA (891bp) protein (297aa)
Bifunctional protein FolD n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y9Z7_BILWA
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
L3_083_088G1_scaffold_288_17
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20738..21283)
DNA (546bp) protein (182aa)
Spermidine N(1)-acetyltransferase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V0H7_9DELT
Spermidine N(1)-acetyltransferase {ECO:0000313|EMBL:EGW42219.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
spermidine acetyltransferase
L3_083_088G1_scaffold_288_18
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21548..23323)
DNA (1776bp) protein (592aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Formate--tetrahydrofolate ligase n=2 Tax=Bilophila RepID=E5Y9Z5_BILWA
formate--tetrahydrofolate ligase
L3_083_088G1_scaffold_288_19
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23494..24168
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y9Z4_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW42221.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
amino acid-binding ACT domain-containing protein
L3_083_088G1_scaffold_288_20
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24288..25664
DNA (1377bp) protein (459aa)
UPF0210 protein HMPREF0178_01027 n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V0I0_9DELT
UPF0210 protein HMPREF0178_01027 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_083_088G1_scaffold_288_21
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25927..26322
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y6V6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44297.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_22
unknown

Not on your lists

26315..26734
DNA (420bp) protein (140aa)

This feature has no annotations

L3_083_088G1_scaffold_288_23
unknown

Not on your lists

26748..27260
DNA (513bp) protein (171aa)

This feature has no annotations

L3_083_088G1_scaffold_288_24
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27352..27519
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003AADB5A
Uncharacterized protein {ECO:0000313|EMBL:EEB31987.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_083_088G1_scaffold_288_25
unknown

Not on your lists

27549..27866
DNA (318bp) protein (106aa)

This feature has no annotations

L3_083_088G1_scaffold_288_26
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27863..28138
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=S2LKL2_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EPC05779.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_27
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28511..28786
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=S2KWV7_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EPC05781.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_28
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28991..30025
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y6Y1_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44219.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_29
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30206..30493
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=S2LBA6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EPC05782.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_083_088G1_scaffold_288_30
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30490..30699
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y6Y2_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44220.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
Displaying items 1-30 of 37 in total

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