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L3_083_088G1_scaffold_301

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_301_1
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(327..659)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33735.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Predicted transcriptional regulators
L3_083_088G1_scaffold_301_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1311..2426
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31044.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_083_088G1_scaffold_301_3
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2461..2694
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MQV4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36140.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_083_088G1_scaffold_301_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2716..3258
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0A6P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47860.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_083_088G1_scaffold_301_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3294..3680
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CM06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68351.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_083_088G1_scaffold_301_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3856..4140
DNA (285bp) protein (95aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FBU9_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY01069.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_083_088G1_scaffold_301_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4523..4732
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99295.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_083_088G1_scaffold_301_8
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4719..5045
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MQW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36148.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_083_088G1_scaffold_301_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5219..5590
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R624_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64316.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_083_088G1_scaffold_301_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5602..6561
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31071.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_088G1_scaffold_301_11
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6790..7152
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58037.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_083_088G1_scaffold_301_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7170..8162
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=G5FJK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03404.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_088G1_scaffold_301_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8199..8753
DNA (555bp) protein (185aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R5U5_9FIRM
probable RNA 2'-phosphotransferase
L3_083_088G1_scaffold_301_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8770..13404
DNA (4635bp) protein (1545aa)
Tetratricopeptide repeat protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDL8_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS10570.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_083_088G1_scaffold_301_15
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13532..13645
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JCQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30283.1}; Flags: Fragment;; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
transposase
L3_083_088G1_scaffold_301_16
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13700..14224
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49413.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Phage integrase family.
L3_083_088G1_scaffold_301_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14534..15409)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98795.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_083_088G1_scaffold_301_18
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15560..16933)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JN26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37227.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
MATE efflux family protein
L3_083_088G1_scaffold_301_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16937..18238)
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=8 Tax=Clostridium RepID=N9XG80_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ63933.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate transporter subunit DctM
L3_083_088G1_scaffold_301_20
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18235..18738)
DNA (504bp) protein (168aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHD1_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EET59918.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TRAP dicarboxylate transporter subunit DctQ
L3_083_088G1_scaffold_301_21
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18752..19774)
DNA (1023bp) protein (341aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHD2_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EET59919.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TRAP dicarboxylate transporter subunit DctP
L3_083_088G1_scaffold_301_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19805..22306)
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39535.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alpha-glucosidase
L3_083_088G1_scaffold_301_23
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22482..23309
DNA (828bp) protein (276aa)
AraC family transcriptional regulator n=8 Tax=Clostridium clostridioforme RepID=N9VV97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62628.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
AraC family transcriptional regulator
L3_083_088G1_scaffold_301_24
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23306..25546
DNA (2241bp) protein (747aa)
Transcriptional regulator, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIS5_CELLD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ81997.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_083_088G1_scaffold_301_25
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25712..27091
DNA (1380bp) protein (460aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D385_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG54204.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
extracellular solute-binding protein
L3_083_088G1_scaffold_301_26
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27168..28058
DNA (891bp) protein (297aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MUC7_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS74393.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ABC transporter permease
L3_083_088G1_scaffold_301_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28064..28897
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5SZT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58793.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter permease
L3_083_088G1_scaffold_301_28
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28911..30806
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MTJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74390.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
glycoside hydrolase family protein
L3_083_088G1_scaffold_301_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30781..31728
DNA (948bp) protein (316aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Beta galactosidase small chain n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D381_9CLOT
glycoside hydrolase family 42
L3_083_088G1_scaffold_301_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31706..31891)
DNA (186bp) protein (62aa)
PspC domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERG0_9FIRM
PspC domain protein {ECO:0000313|EMBL:EEQ60604.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Putative stress-responsive transcriptional regulator
Displaying items 1-30 of 47 in total

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