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L3_083_088G1_scaffold_326

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_326_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(121..1509)
DNA (1389bp) protein (463aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=E7GSP8_CLOSY
MATE efflux family protein {ECO:0000313|EMBL:EGA92188.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative efflux protein, MATE family
L3_083_088G1_scaffold_326_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..3019)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CX28_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05120.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_088G1_scaffold_326_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3046..4236)
DNA (1191bp) protein (397aa)
amidohydrolase (EC:3.5.1.-)
Thermostable carboxypeptidase 1 n=4 Tax=Clostridium RepID=E7GSP5_CLOSY
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:EGA92185.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_088G1_scaffold_326_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4852..6609
DNA (1758bp) protein (586aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=2 Tax=Clostridium symbiosum RepID=E7GSP4_CLOSY
L3_083_088G1_scaffold_326_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6696..7964
DNA (1269bp) protein (423aa)
Imidazolonepropionase {ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|SAAS:SAAS00083112};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEJ9_9CLOT
L3_083_088G1_scaffold_326_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7955..8521
DNA (567bp) protein (189aa)
formiminotetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formiminotransferase-cyclodeaminase n=3 Tax=Clostridium RepID=U2D2M0_CLOSY
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:ERI73771.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_088G1_scaffold_326_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8598..9476
DNA (879bp) protein (293aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=4 Tax=Clostridium RepID=E7GSP1_CLOSY
Glutamate formimidoyltransferase {ECO:0000313|EMBL:ERI73770.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_088G1_scaffold_326_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9726..10058)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSP0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92180.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_088G1_scaffold_326_9
unknown

Not on your lists

comp(10045..10155)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_083_088G1_scaffold_326_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10155..13061)
DNA (2907bp) protein (969aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridium symbiosum RepID=E9SI91_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92258.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
regulatory protein
L3_083_088G1_scaffold_326_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13212..14147)
DNA (936bp) protein (312aa)
Sensory box/GGDEF domain-containing protein n=2 Tax=Clostridium symbiosum RepID=E7GSN8_CLOSY
Sensory box/GGDEF domain-containing protein {ECO:0000313|EMBL:EGA92257.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
signaling protein
L3_083_088G1_scaffold_326_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14422..15942
DNA (1521bp) protein (507aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=3 Tax=Clostridium symbiosum RepID=E7GSN7_CLOSY
L3_083_088G1_scaffold_326_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16101..17240)
DNA (1140bp) protein (380aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=2 Tax=Clostridium symbiosum RepID=E9SI88_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92255.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_088G1_scaffold_326_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17262..18110)
DNA (849bp) protein (283aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium RepID=E9SI87_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03988.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RpiR family transcriptional regulator
L3_083_088G1_scaffold_326_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18368..19327)
DNA (960bp) protein (320aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03987.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_088G1_scaffold_326_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19507..20805)
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter n=2 Tax=Clostridium symbiosum RepID=E7GSN3_CLOSY
TRAP dicarboxylate transporter {ECO:0000313|EMBL:EGA92252.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP dicarboxylate transporter subunit DctM
L3_083_088G1_scaffold_326_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20802..21332)
DNA (531bp) protein (177aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN2_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92251.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter permease
L3_083_088G1_scaffold_326_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21365..22423)
DNA (1059bp) protein (353aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN1_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92250.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein
L3_083_088G1_scaffold_326_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22439..23977)
DNA (1539bp) protein (513aa)
Xylulokinase (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=2 Tax=Clostridium RepID=U2BNG5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03983.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_088G1_scaffold_326_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24013..24855)
DNA (843bp) protein (281aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=3 Tax=Clostridium RepID=E9SI81_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92248.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_083_088G1_scaffold_326_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24914..25951)
DNA (1038bp) protein (346aa)
Sorbitol dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM8_CLOSY
Sorbitol dehydrogenase {ECO:0000313|EMBL:EGA92247.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
alcohol dehydrogenase
L3_083_088G1_scaffold_326_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26281..31506)
DNA (5226bp) protein (1742aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03980.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_088G1_scaffold_326_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31525..31980)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92245.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_088G1_scaffold_326_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32290..33066
DNA (777bp) protein (259aa)
Methyltransferase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM5_CLOSY
Methyltransferase {ECO:0000313|EMBL:EGA92244.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
methyltransferase domain-containing protein
L3_083_088G1_scaffold_326_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33174..34508)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92243.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
dctM; TRAP dicarboxylate transporter subunit DctM
L3_083_088G1_scaffold_326_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34505..34996)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92242.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
Displaying 26 items

View Taxonomy