ggKbase home page

L3_083_088G1_scaffold_327

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_327_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1135)
DNA (1134bp) protein (378aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridiales RepID=B0A9N4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDQ96743.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Uncharacterized FAD-dependent dehydrogenases
L3_083_088G1_scaffold_327_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1187..1864)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09894.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA alkylation repair enzyme
L3_083_088G1_scaffold_327_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2282..2821)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09895.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
general stress protein
L3_083_088G1_scaffold_327_4

Not on your lists


3234..4493
DNA (1260bp) protein (420aa)
S1 RNA binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XML8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ15298.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
30S ribosomal protein S1
L3_083_088G1_scaffold_327_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4580..5293
DNA (714bp) protein (238aa)
PHP domain protein {ECO:0000313|EMBL:EDQ96738.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDQ96738.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
PHP domain protein n=2 Tax=Clostridiales RepID=B0A9M9_9FIRM
hydrolase
L3_083_088G1_scaffold_327_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5947..7692
DNA (1746bp) protein (582aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
2-isopropylmalate synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9M8_9FIRM
leuA; 2-isopropylmalate synthase
L3_083_088G1_scaffold_327_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7813..9102
DNA (1290bp) protein (430aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9M7_9FIRM
3-isopropylmalate dehydratase large subunit
L3_083_088G1_scaffold_327_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9104..9592
DNA (489bp) protein (163aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X531_9CLOT
L3_083_088G1_scaffold_327_9

Not on your lists

9681..10751
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9M5_9FIRM
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ETJ15303.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
leuB; 3-isopropylmalate dehydrogenase
L3_083_088G1_scaffold_327_10

Not on your lists

11369..11956
DNA (588bp) protein (196aa)
UPI0003D6451C related cluster n=1 Tax=unknown RepID=UPI0003D6451C
Uncharacterized protein {ECO:0000313|EMBL:ETJ15307.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
methyltransferase type 11
L3_083_088G1_scaffold_327_11

Not on your lists

12403..13758
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ15316.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_088G1_scaffold_327_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13919..15598
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09904.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_088G1_scaffold_327_13

Not on your lists

15668..16465
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15318.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_083_088G1_scaffold_327_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16664..18238
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XMM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09906.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_083_088G1_scaffold_327_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18247..19236
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09907.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Transglutaminase-like superfamily.
L3_083_088G1_scaffold_327_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19272..20609
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09908.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
serine/threonine protein kinase
L3_083_088G1_scaffold_327_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20655..21476
DNA (822bp) protein (274aa)
von Willebrand factor type A domain protein n=2 Tax=Clostridiales RepID=B0A9L7_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDA09909.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
von Willebrand factor type A
L3_083_088G1_scaffold_327_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21544..22797
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96725.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_088G1_scaffold_327_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22844..23176
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96724.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_083_088G1_scaffold_327_20

Not on your lists

23207..23992
DNA (786bp) protein (262aa)
von Willebrand factor type A domain protein n=2 Tax=Clostridiales RepID=B0A9L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15325.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
von Willebrand factor type A
L3_083_088G1_scaffold_327_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24017..25837
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09913.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
serine/threonine protein kinase
L3_083_088G1_scaffold_327_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25966..26649)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09914.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
L3_083_088G1_scaffold_327_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26992..33027
DNA (6036bp) protein (2012aa)
NPCBM/NEW2 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X547_9CLOT
NPCBM/NEW2 domain protein {ECO:0000313|EMBL:CDA09915.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
F5/8 type C domain protein
L3_083_088G1_scaffold_327_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33121..34923
DNA (1803bp) protein (601aa)
NPCBM/NEW2 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XMN3_9CLOT
NPCBM/NEW2 domain protein {ECO:0000313|EMBL:CDA09916.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
Displaying 24 items

View Taxonomy