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L3_083_088G1_scaffold_340

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_340_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(380..1057)
DNA (678bp) protein (226aa)
Sortase, SrtB family {ECO:0000313|EMBL:EQE60467.1}; EC=3.4.22.71 {ECO:0000313|EMBL:EQE60467.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Sortase, SrtB family n=145 Tax=Clostridium difficile RepID=T3GD26_CLODC
peptidase C60B
L3_083_088G1_scaffold_340_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1810..4344
DNA (2535bp) protein (845aa)
Sporulation related domain protein n=2 Tax=Clostridium difficile RepID=T4PBX1_CLODI
Putative sporulation protein {ECO:0000313|EMBL:CCL23078.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
surface protein
L3_083_088G1_scaffold_340_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4467..6458
DNA (1992bp) protein (664aa)
Uncharacterized protein n=109 Tax=Clostridium difficile RepID=T3GEW3_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CCL23077.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
mldB; conserved hypothetical protein
L3_083_088G1_scaffold_340_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6448..6768
DNA (321bp) protein (107aa)
Uncharacterized protein n=202 Tax=Clostridium difficile RepID=C9XN86_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE60483.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_088G1_scaffold_340_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6960..7835
DNA (876bp) protein (292aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
UTP--glucose-1-phosphate uridylyltransferase n=212 Tax=Clostridium difficile RepID=C9XN85_CLODC
gtaB; UTP--glucose-1-phosphate uridylyltransferase
L3_083_088G1_scaffold_340_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7859..8872
DNA (1014bp) protein (338aa)
UDP-glucose 4-epimerase GalE {ECO:0000313|EMBL:EQE60474.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EQE60474.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
UDP-glucose 4-epimerase n=199 Tax=Clostridium difficile RepID=C9XN84_CLODC
galE; UDP-glucose 4-epimerase
L3_083_088G1_scaffold_340_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8957..10918
DNA (1962bp) protein (654aa)
ErfK/YbiS/YcfS/YnhG n=42 Tax=Clostridium difficile RepID=G6C038_CLODI
Cwp22 {ECO:0000313|EMBL:AFV69533.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cell surface protein
L3_083_088G1_scaffold_340_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11073..11936
DNA (864bp) protein (288aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=C9XN82_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30980.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_083_088G1_scaffold_340_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12144..13025)
DNA (882bp) protein (294aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium difficile P42 RepID=T4PIQ6_CLODI
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ69597.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_083_088G1_scaffold_340_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13438..14286
DNA (849bp) protein (283aa)
AP endonuclease, family 2 n=169 Tax=Clostridium difficile RepID=G6C035_CLODI
sugar phosphate epimerase/isomerase
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQG75833.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_340_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14365..16287
DNA (1923bp) protein (641aa)
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:CKH42254.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH42254.1};; Putative oxidoreductase {ECO:0000313|EMBL:CDS88304.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Flavin oxidoreductase / NADH oxidase family protein n=12 Tax=Clostridium difficile RepID=T2XIP5_CLODI
oxidoreductase
L3_083_088G1_scaffold_340_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16369..17232
DNA (864bp) protein (288aa)
aroE2; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Shikimate dehydrogenase n=7 Tax=Clostridium difficile RepID=Q183E3_CLOD6
L3_083_088G1_scaffold_340_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17432..18649
DNA (1218bp) protein (406aa)
Sugar (And other) transporter family protein n=2 Tax=Clostridium difficile RepID=T4PI10_CLODI
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EQE60453.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
transport protein
L3_083_088G1_scaffold_340_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18885..20750
DNA (1866bp) protein (622aa)
HIRAN domain protein n=1 Tax=Clostridium difficile P42 RepID=T4PIQ2_CLODI
HIRAN domain protein {ECO:0000313|EMBL:EQE60471.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
conserved hypothetical protein
L3_083_088G1_scaffold_340_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20928..21101)
DNA (174bp) protein (58aa)
Amidohydrolase family protein n=17 Tax=Clostridium difficile RepID=T2WB33_CLODI
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:EQG75936.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_340_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21117..22292)
DNA (1176bp) protein (392aa)
putative amidohydrolase (EC:3.5.-.-)
Putative amidohydrolase {ECO:0000313|EMBL:CCL23065.1}; EC=3.5.-.- {ECO:0000313|EMBL:CCL23065.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Amidohydrolase family protein n=131 Tax=Clostridium difficile RepID=T3GAD9_CLODC
L3_083_088G1_scaffold_340_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22471..23814)
DNA (1344bp) protein (448aa)
Permease family protein n=198 Tax=Clostridium difficile RepID=T2TDW8_CLODI
putative permease
Permease family protein {ECO:0000313|EMBL:EQG75643.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_340_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24317..24970
DNA (654bp) protein (218aa)
Pentapeptide repeats family protein n=176 Tax=Clostridium difficile RepID=T3GEZ7_CLODC
putative pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:EHJ32854.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_083_088G1_scaffold_340_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25111..26382
DNA (1272bp) protein (424aa)
Branched-chain amino acid transport system II carrier protein n=189 Tax=Clostridium difficile RepID=T3GAF2_CLODC
brnQ; Branched-chain amino acid transport system IIcarrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CCL23062.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_083_088G1_scaffold_340_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26584..27771
DNA (1188bp) protein (396aa)
Putative lipoprotein n=22 Tax=Clostridium difficile RepID=Q183D5_CLOD6
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EHJ32852.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_083_088G1_scaffold_340_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27954..29978)
DNA (2025bp) protein (675aa)
Sigma-54 interaction domain protein n=10 Tax=Clostridium difficile RepID=G6B552_CLODI
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EHJ32851.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Transcriptional regulator, sigma-54 dependent
L3_083_088G1_scaffold_340_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30368..31036
DNA (669bp) protein (223aa)
Transporter gate domain protein n=175 Tax=Clostridium difficile RepID=G6C024_CLODI
putative membrane protein
Nucleoside recognition family protein {ECO:0000313|EMBL:EQG76317.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_083_088G1_scaffold_340_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31038..31523
DNA (486bp) protein (162aa)
Transporter gate domain protein n=198 Tax=Clostridium difficile RepID=G6C023_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL30966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_083_088G1_scaffold_340_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31584..32705
DNA (1122bp) protein (374aa)
Amidohydrolase family protein n=2 Tax=Clostridium difficile RepID=T4PI00_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EQE60465.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
amidohydrolase
L3_083_088G1_scaffold_340_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32986..33819
DNA (834bp) protein (278aa)
C-S lyase family protein n=7 Tax=Clostridium difficile RepID=T3A0T0_CLODI
putative pyridoxal phosphate-dependenttransferase
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CAJ69582.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Displaying 25 items

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