ggKbase home page

L3_083_088G1_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_372_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

274..1491
DNA (1218bp) protein (406aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCT4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85611.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
integrase
L3_083_088G1_scaffold_372_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1607..2392
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI0003708F15
Uncharacterized protein {ECO:0000313|EMBL:KEJ85610.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TIR protein
L3_083_088G1_scaffold_372_3
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2499..2780)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85609.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_088G1_scaffold_372_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2785..3072)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I566_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85608.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_088G1_scaffold_372_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3412..3720
DNA (309bp) protein (103aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A069_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85607.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
excisionase
L3_083_088G1_scaffold_372_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3701..4933
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9GJG1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:KEJ85606.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
virulence-associated E family protein
L3_083_088G1_scaffold_372_7
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5255..6235
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YE19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85605.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transposon-related/mobilization protein
L3_083_088G1_scaffold_372_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6392..6775
DNA (384bp) protein (128aa)
Mobilization protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z874_ODOSD
Uncharacterized protein {ECO:0000313|EMBL:KEJ85604.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
mobilization protein
L3_083_088G1_scaffold_372_9
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6741..7664
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZMJ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85603.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
mobilization protein
L3_083_088G1_scaffold_372_10
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7669..8394
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z872_ODOSD
Uncharacterized protein {ECO:0000313|EMBL:KEJ85602.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_088G1_scaffold_372_11
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8437..8769)
DNA (333bp) protein (111aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=F3PW79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF52428.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_083_088G1_scaffold_372_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8900..9385)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBH0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85600.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_088G1_scaffold_372_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9591..10268)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YRT9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85599.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
putative intracellular protease/amidase
L3_083_088G1_scaffold_372_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10277..10786)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YBL8_BACSE
Nitroreductase family protein {ECO:0000313|EMBL:EXZ93491.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Nitroreductase
L3_083_088G1_scaffold_372_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10888..11724
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZI24_BACSE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85597.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transcription regulator
L3_083_088G1_scaffold_372_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11781..13163
DNA (1383bp) protein (461aa)
Divergent AAA domain protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2E428_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85596.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
ArsR family transcriptional regulator
L3_083_088G1_scaffold_372_17
unknown

Not on your lists

comp(13409..13501)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_083_088G1_scaffold_372_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13921..14151
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2E8R0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85595.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_088G1_scaffold_372_19
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14179..14484
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CWK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE23648.1}; TaxID=1235813 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 10003.;"
immunity repressor protein
L3_083_088G1_scaffold_372_20
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14481..15341
DNA (861bp) protein (287aa)
putative RNA-directed DNA polymerase from retron (EC:2.7.7.49)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CEL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85593.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_088G1_scaffold_372_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15484..15675)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K5YZL1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85592.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_088G1_scaffold_372_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15697..16569)
DNA (873bp) protein (291aa)
Putative membrane protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCR2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85591.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_088G1_scaffold_372_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16733..17206
DNA (474bp) protein (158aa)
Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LIS5_PARD8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDB48718.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_083_088G1_scaffold_372_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17307..18113
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroidales RepID=D0TCR0_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KEJ85588.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_088G1_scaffold_372_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18212..18574
DNA (363bp) protein (121aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LIS7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB48716.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_083_088G1_scaffold_372_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18610..19344
DNA (735bp) protein (245aa)
Methyltransferase domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85586.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
methyltransferase
L3_083_088G1_scaffold_372_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19359..20096
DNA (738bp) protein (246aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCQ7_9BACE
aluminum resistance protein
L3_083_088G1_scaffold_372_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20106..20570
DNA (465bp) protein (155aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=5 Tax=Bacteroidales RepID=D0TCQ6_9BACE
7-cyano-7-deazaguanine reductase
L3_083_088G1_scaffold_372_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20658..21455
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6LIT1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74990.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_088G1_scaffold_372_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21701..22249)
DNA (549bp) protein (183aa)
Putative DNA metabolism protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCQ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85582.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
Displaying items 1-30 of 59 in total

View Taxonomy