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L3_083_088G1_scaffold_319

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_319_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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355..1467
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSQ6_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:KGJ51162.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L3_083_088G1_scaffold_319_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1452..2345
DNA (894bp) protein (298aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B104_9FIRM
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54425.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L3_083_088G1_scaffold_319_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2446..2985
DNA (540bp) protein (180aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=5 Tax=Firmicutes RepID=E4LXZ9_9CLOT
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CDC85492.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_088G1_scaffold_319_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3416..4636)
DNA (1221bp) protein (407aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087750}; EC=2.4.2.29 {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087822};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=7 Tax=Firmicutes RepID=E4LXZ8_9CLOT
L3_083_088G1_scaffold_319_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4623..5267)
DNA (645bp) protein (215aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B101_9FIRM
Membrane protein {ECO:0000313|EMBL:KGJ51158.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_088G1_scaffold_319_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5640..6014
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSR1_9FIRM
Molecular chaperone Hsp90 {ECO:0000313|EMBL:KGJ51157.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_088G1_scaffold_319_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6256..6576
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXZ5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EQJ54418.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_088G1_scaffold_319_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6662..8275)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85497.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
exosporium glycoprotein
L3_083_088G1_scaffold_319_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8467..10734)
DNA (2268bp) protein (756aa)
Putative excinuclease ABC, A subunit n=1 Tax=Clostridium sp. HGF2 RepID=E4LXZ3_9CLOT
Putative excinuclease ABC, A subunit {ECO:0000313|EMBL:EFR36154.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter
L3_083_088G1_scaffold_319_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11173..12273
DNA (1101bp) protein (367aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:EQJ54415.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EQJ54415.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Alcohol dehydrogenase, iron-dependent n=5 Tax=Firmicutes RepID=E4LXZ2_9CLOT
L3_083_088G1_scaffold_319_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12550..13080
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BDU6_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KGJ51152.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Dihydrofolate reductase
L3_083_088G1_scaffold_319_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13127..13723)
DNA (597bp) protein (199aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VSR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87611.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative prophage repressor
L3_083_088G1_scaffold_319_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13888..15141
DNA (1254bp) protein (418aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
ImpB/MucB/SamB family protein n=3 Tax=Firmicutes RepID=E4LXY9_9CLOT
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EFR36251.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_088G1_scaffold_319_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15131..15478
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0Z2_9FIRM
YolD-like family protein {ECO:0000313|EMBL:EQJ54411.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_088G1_scaffold_319_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16172..17641
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z1_9FIRM
GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ51148.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
transcriptional regulator
L3_083_088G1_scaffold_319_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17855..19801)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87607.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_083_088G1_scaffold_319_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19941..21008)
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LXY4_9CLOT
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54408.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L3_083_088G1_scaffold_319_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21206..21619
DNA (414bp) protein (138aa)
Peptide deformylase n=5 Tax=Firmicutes RepID=E4LXY3_9CLOT
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
N-formylmethionyl-tRNA deformylase
L3_083_088G1_scaffold_319_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21984..22982
DNA (999bp) protein (333aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Firmicutes RepID=E4LXY2_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFR36152.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_083_088G1_scaffold_319_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22983..23114
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54404.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_088G1_scaffold_319_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23386..23877
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BDV6_9FIRM
Cobalamin adenosyltransferase family protein {ECO:0000313|EMBL:EQJ54403.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_088G1_scaffold_319_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23874..24386
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LXY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36389.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_083_088G1_scaffold_319_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24370..24804
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87601.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_088G1_scaffold_319_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25194..25883
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=7 Tax=Firmicutes RepID=E4LXX7_9CLOT
Two-component system response regulator VanR {ECO:0000313|EMBL:ENY87600.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_083_088G1_scaffold_319_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25880..27013
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSS9_9FIRM
signal transduction histidine kinase
L3_083_088G1_scaffold_319_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27500..28420
DNA (921bp) protein (307aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=5 Tax=Firmicutes RepID=E4LXX4_9CLOT
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQJ54395.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_088G1_scaffold_319_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28624..28893
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LXX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ51137.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_083_088G1_scaffold_319_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29267..29638
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=7 Tax=Firmicutes RepID=E4LXX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87597.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Predicted transcriptional regulators
L3_083_088G1_scaffold_319_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29641..30492
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LXX1_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ54391.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type multidrug transport system, ATPase component
L3_083_088G1_scaffold_319_30
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30489..31145
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VST3_9FIRM
Membrane protein {ECO:0000313|EMBL:KGJ51134.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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