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L3_083_088G1_scaffold_448

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_088G1_scaffold_448_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88737.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_083_088G1_scaffold_448_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(372..1028)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88738.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_088G1_scaffold_448_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1035..2351)
DNA (1317bp) protein (439aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
M18 family aminopeptidase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQC6_9FIRM
aminopeptidase
L3_083_088G1_scaffold_448_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2636..4060)
DNA (1425bp) protein (475aa)
Amino acid permease n=5 Tax=Firmicutes RepID=E4LUP9_9CLOT
Amino acid permease {ECO:0000313|EMBL:KGJ54517.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Amino acid transporters
L3_083_088G1_scaffold_448_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4276..4890
DNA (615bp) protein (205aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQC8_9FIRM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ENY88741.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Sua5/YciO/YrdC/YwlC family protein
L3_083_088G1_scaffold_448_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5075..6262
DNA (1188bp) protein (396aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ54519.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
SARP family transcriptional regulator
L3_083_088G1_scaffold_448_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6337..7554
DNA (1218bp) protein (406aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LUP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86307.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_088G1_scaffold_448_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7561..7977
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86306.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_088G1_scaffold_448_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8124..8783
DNA (660bp) protein (220aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LUP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37495.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_083_088G1_scaffold_448_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8807..9514
DNA (708bp) protein (236aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ54523.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_088G1_scaffold_448_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9507..10346
DNA (840bp) protein (280aa)
LPXTG-motif cell wall anchor domain protein n=4 Tax=Firmicutes RepID=E4LUP2_9CLOT
Cell wall anchor protein {ECO:0000313|EMBL:KGJ54524.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_083_088G1_scaffold_448_12
unknown

Not on your lists

10394..10498
DNA (105bp) protein (35aa)

This feature has no annotations

L3_083_088G1_scaffold_448_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10610..11161
DNA (552bp) protein (184aa)
Signal peptidase I n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ54525.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
signal peptidase I
L3_083_088G1_scaffold_448_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11322..11963
DNA (642bp) protein (214aa)
SipW-cognate class signal peptide n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F5E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ54526.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_083_088G1_scaffold_448_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12242..16234
DNA (3993bp) protein (1331aa)
Fibro-slime domain n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNS8_9FIRM
Fibro-slime domain {ECO:0000313|EMBL:CCY14407.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
fibro-slime domain protein
L3_083_088G1_scaffold_448_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16236..16841
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LUP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86301.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_088G1_scaffold_448_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17070..17714
DNA (645bp) protein (215aa)
SipW-cognate class signal peptide domain protein n=5 Tax=Firmicutes RepID=T4NML1_CLODI
SipW-cognate class signal peptide {ECO:0000313|EMBL:CDC86300.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_088G1_scaffold_448_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17800..17979
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86299.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_088G1_scaffold_448_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17972..18475
DNA (504bp) protein (168aa)
Signal peptidase I n=4 Tax=Firmicutes RepID=E4LUN7_9CLOT
Signal peptidase I {ECO:0000313|EMBL:CDC86298.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
signal peptidase I
L3_083_088G1_scaffold_448_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19017..19457
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EFR37485.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EFR37485.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=5 Tax=Firmicutes RepID=E4LUN6_9CLOT
L3_083_088G1_scaffold_448_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19477..19788
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LUN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37509.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_088G1_scaffold_448_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19800..20528
DNA (729bp) protein (243aa)
Phage protein Gp37/Gp68 n=5 Tax=Firmicutes RepID=E4LUN4_9CLOT
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:EFR37503.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_083_088G1_scaffold_448_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20545..20919
DNA (375bp) protein (125aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LUN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88755.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_083_088G1_scaffold_448_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20968..22197
DNA (1230bp) protein (410aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Serine hydroxymethyltransferase n=4 Tax=Firmicutes RepID=H1AYV2_9FIRM
serine hydroxymethyltransferase
L3_083_088G1_scaffold_448_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22418..23305)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=5 Tax=Firmicutes RepID=E4LUN1_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EFR37504.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cynR2; HTH-type transcriptional regulator CynR
L3_083_088G1_scaffold_448_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23412..24659
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AYV4_9FIRM
Transporter, CPA2 family {ECO:0000313|EMBL:EFR37478.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
transporter
L3_083_088G1_scaffold_448_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24809..26752)
DNA (1944bp) protein (648aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Firmicutes RepID=E4LUM9_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFR37469.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Transcriptional antiterminator
Displaying 27 items

View Taxonomy