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L3_083_119G1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_15_1
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(275..745)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SBE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58483.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_083_119G1_scaffold_15_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1289..4897)
DNA (3609bp) protein (1203aa)
hypothetical protein n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028A363E
Uncharacterized protein {ECO:0000313|EMBL:EDS05641.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_083_119G1_scaffold_15_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4929..5165)
DNA (237bp) protein (79aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036BA394
hypothetical protein
L3_083_119G1_scaffold_15_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5350..5727)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62570.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_083_119G1_scaffold_15_5
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5745..7175)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAJ8_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20996.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
MobA/MobL family.
L3_083_119G1_scaffold_15_6
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7362..7622)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YXS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62572.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_083_119G1_scaffold_15_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7700..7933)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83246.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_083_119G1_scaffold_15_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8038..9018)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL57_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83245.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
KaiC.
L3_083_119G1_scaffold_15_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9121..9498)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83244.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_083_119G1_scaffold_15_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9501..10556)
DNA (1056bp) protein (352aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL55_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEA83243.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinase XerD
L3_083_119G1_scaffold_15_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10575..10751)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74278.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
HTH domain.
L3_083_119G1_scaffold_15_12
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10933..11478
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YDD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62578.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted transcriptional regulators
L3_083_119G1_scaffold_15_13
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..12058
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. P22 RepID=T2LNZ7_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFZ30788.1}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
hypothetical protein
L3_083_119G1_scaffold_15_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12207..13748)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
GMP synthase large subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZB1_9CLOT
L3_083_119G1_scaffold_15_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..15659
DNA (1473bp) protein (491aa)
Putative signaling protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCV4_9CLOT
Putative signaling protein {ECO:0000313|EMBL:CDD41319.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signaling protein
L3_083_119G1_scaffold_15_16
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15759..16676
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8M7_DESOD
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AET67454.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_083_119G1_scaffold_15_17
unknown

Not on your lists

17030..17185
DNA (156bp) protein (52aa)

This feature has no annotations

L3_083_119G1_scaffold_15_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17201..17959
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TYS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ58105.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
carboxymuconolactone decarboxylase family protein
L3_083_119G1_scaffold_15_19
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17980..18504
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14189.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_119G1_scaffold_15_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18585..19511
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00213.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
LysR family transcriptional regulator
L3_083_119G1_scaffold_15_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19537..20511
DNA (975bp) protein (325aa)
Aldo/keto reductase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XGR5_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:ENY98892.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
aryl-alcohol dehydrogenase
L3_083_119G1_scaffold_15_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20677..21387
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57047.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LytTR family two component transcriptional regulator
L3_083_119G1_scaffold_15_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21384..22697
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57046.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
virS; two-component sensor kinase VirS
L3_083_119G1_scaffold_15_24
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22808..23968
DNA (1161bp) protein (387aa)
Alcohol dehydrogenase (NADP(+)) n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXT6_9CLOT
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03685.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_083_119G1_scaffold_15_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24257..25330
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44137.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transglutaminase-like superfamily.
L3_083_119G1_scaffold_15_26
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25317..27185
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F3Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99780.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ATP-dependent DNA helicase RecQ
L3_083_119G1_scaffold_15_27
unknown

Not on your lists

27149..27241
DNA (93bp) protein (31aa)

This feature has no annotations

L3_083_119G1_scaffold_15_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27265..28374
DNA (1110bp) protein (370aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL72_9CLOT
L3_083_119G1_scaffold_15_29
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28414..28851)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7ADA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD58778.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L3_083_119G1_scaffold_15_30
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28942..30834)
DNA (1893bp) protein (631aa)
ABC transporter ATP-binding protein/permease n=1 Tax=Clostridium bolteae 90B8 RepID=R0B981_9CLOT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJJ72541.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATP-binding cassette subfamily B protein
Displaying items 1-30 of 176 in total

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