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L3_083_119G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_88_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(277..2091)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90180.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_083_119G1_scaffold_88_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2073..3245)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90179.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative glucoronyl hydrolase
L3_083_119G1_scaffold_88_3
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3258..4964)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TJP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ90150.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_083_119G1_scaffold_88_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5393..5746)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N801_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EXG87652.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_083_119G1_scaffold_88_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5799..7097)
DNA (1299bp) protein (433aa)
Di-and tricarboxylate transporters n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4L7_9CLOT
Di-and tricarboxylate transporters {ECO:0000313|EMBL:CDC50281.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Di-and tricarboxylate transporters
L3_083_119G1_scaffold_88_6
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7510..8580)
DNA (1071bp) protein (357aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=3 Tax=Clostridium RepID=D6DH13_CLOSC
L3_083_119G1_scaffold_88_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8599..9507)
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RY30_9CLOT
L3_083_119G1_scaffold_88_8
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9613..10773)
DNA (1161bp) protein (387aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EFE12246.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EFE12246.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Alcohol dehydrogenase, class IV n=3 Tax=Clostridiales RepID=D4MSX5_9FIRM
Alcohol dehydrogenase, class IV
L3_083_119G1_scaffold_88_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10838..11998)
DNA (1161bp) protein (387aa)
Predicted neuraminidase (Sialidase) n=3 Tax=Clostridium RepID=D6DH16_CLOSC
Predicted neuraminidase (sialidase)
Predicted neuraminidase (Sialidase) {ECO:0000313|EMBL:CCY83541.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_083_119G1_scaffold_88_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12047..13300)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12244.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_119G1_scaffold_88_11
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13363..15342
DNA (1980bp) protein (660aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=3 Tax=Clostridiales RepID=D4MSX4_9FIRM
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CBL36860.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_083_119G1_scaffold_88_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15421..15834
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LI60_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EET59716.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Predicted membrane protein
L3_083_119G1_scaffold_88_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15942..16226
DNA (285bp) protein (95aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU2_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EEQ61086.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sporulation transcriptional regulator SpoIIID
L3_083_119G1_scaffold_88_14
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16339..16923)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CD50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12386.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_119G1_scaffold_88_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16920..17789)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WVL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91562.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_083_119G1_scaffold_88_16
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18165..18881
DNA (717bp) protein (239aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JTT4_9FIRM
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EOS37316.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
nicotinamide mononucleotide transporter PnuC
L3_083_119G1_scaffold_88_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19168..20214
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AGH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD41707.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_083_119G1_scaffold_88_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20338..21672)
DNA (1335bp) protein (445aa)
Glycoside hydrolase family 4 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW70_9CLOT
Glycoside hydrolase family 4 {ECO:0000313|EMBL:CCY40971.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycoside hydrolase
L3_083_119G1_scaffold_88_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21699..23282)
DNA (1584bp) protein (528aa)
PTS system glucose-like IIB subunint n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW15_9CLOT
PTS system glucose-like IIB subunint {ECO:0000313|EMBL:CCY40972.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system glucose-like transporter subunit IIB
L3_083_119G1_scaffold_88_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23462..24217)
DNA (756bp) protein (252aa)
Transcriptional regulator RpiR family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFS7_9CLOT
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCY40973.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RpiR family transcriptional regulator
L3_083_119G1_scaffold_88_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24230..25036)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40975.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
L3_083_119G1_scaffold_88_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25120..25695)
DNA (576bp) protein (192aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CBK78638.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CBK78638.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
O-6-methylguanine DNA methyltransferase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DLR4_CLOSC
L3_083_119G1_scaffold_88_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25838..26230)
DNA (393bp) protein (131aa)
2-iminobutanoate/2-iminopropanoate deaminase {ECO:0000313|EMBL:KJJ70164.1}; EC=3.5.99.10 {ECO:0000313|EMBL:KJJ70164.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Endoribonuclease L-PSP n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHV2_9CLOT
endoribonuclease L-PSP
L3_083_119G1_scaffold_88_24
unknown

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comp(26203..26394)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_083_119G1_scaffold_88_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26428..27732)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40977.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Polynucleotide adenylyltransferase region
L3_083_119G1_scaffold_88_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27732..29171)
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFT3_9CLOT
L3_083_119G1_scaffold_88_27
unknown

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29227..29472
DNA (246bp) protein (82aa)

This feature has no annotations

L3_083_119G1_scaffold_88_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30100..30756)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RMS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50218.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_083_119G1_scaffold_88_29
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30935..31489)
DNA (555bp) protein (185aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Clostridium sp. ASF502 RepID=N2BD88_9CLOT
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EMZ34764.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_083_119G1_scaffold_88_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31597..33048)
DNA (1452bp) protein (484aa)
Cytosine deaminase and related metal-dependent hydrolases (EC:3.5.4.3)
Guanine deaminase (Guanase) n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMC3_9CLOT
Guanine deaminase (Guanase) {ECO:0000313|EMBL:CCY43250.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 86 in total

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