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L3_083_119G1_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_99_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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471..2564
DNA (2094bp) protein (698aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEQ58883.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEQ58883.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF95_9FIRM
L3_083_119G1_scaffold_99_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2704..2949
DNA (246bp) protein (82aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RQ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26291.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
pflB; pyruvate formate-lyase (C-terminus)
L3_083_119G1_scaffold_99_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3063..3815
DNA (753bp) protein (251aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CSX1_9CLOT
L3_083_119G1_scaffold_99_4
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3924..4790)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2Y707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60268.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
xylose isomerase
L3_083_119G1_scaffold_99_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4806..5807)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RSK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65206.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
lipopolysaccharide biosynthesis protein
L3_083_119G1_scaffold_99_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5885..7078)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60266.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
oxidoreductase
L3_083_119G1_scaffold_99_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7115..8011)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88149.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
sugar phosphate isomerase
L3_083_119G1_scaffold_99_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8194..9423)
DNA (1230bp) protein (410aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AH00_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC98916.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
two-component system, response regulator YesN
L3_083_119G1_scaffold_99_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9622..9789
DNA (168bp) protein (56aa)
Ferredoxin n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMJ7_9CLOT
Ferredoxin {ECO:0000313|EMBL:EHE97273.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L3_083_119G1_scaffold_99_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9966..10703
DNA (738bp) protein (246aa)
Peptidase C26 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGX8_9CLOT
Peptidase C26 {ECO:0000313|EMBL:CCY39544.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase C26
L3_083_119G1_scaffold_99_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10687..11487)
DNA (801bp) protein (267aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XGU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19369.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_083_119G1_scaffold_99_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11484..12050)
DNA (567bp) protein (189aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z9X0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ36590.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
RNA polymerase, sigma subunit, ECF family
L3_083_119G1_scaffold_99_13
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12203..12898)
DNA (696bp) protein (232aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=10 Tax=Clostridium RepID=G5HY70_9CLOT
L3_083_119G1_scaffold_99_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12885..13931)
DNA (1047bp) protein (349aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFA7_9FIRM
anthranilate phosphoribosyltransferase
L3_083_119G1_scaffold_99_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13956..14543)
DNA (588bp) protein (196aa)
Aminodeoxychorismate/anthranilate synthase component 2 {ECO:0000313|EMBL:KJJ77864.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KJJ77864.1};; EC=4.1.3.27 {ECO:0000313|EMBL:KJJ77864.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMI7_9CLOT
glutamine amidotransferase of anthranilate synthase
L3_083_119G1_scaffold_99_16
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14540..16048)
DNA (1509bp) protein (503aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:KJJ77863.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KJJ77863.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
anthranilate synthase (EC:4.1.3.27)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMI6_9CLOT
L3_083_119G1_scaffold_99_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16504..17148)
DNA (645bp) protein (215aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2F7_9CLOT
L3_083_119G1_scaffold_99_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17170..18477)
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM67_9CLOT
thiamine biosynthesis protein ThiC
L3_083_119G1_scaffold_99_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18784..19638)
DNA (855bp) protein (285aa)
Putative phosphatase YwpJ {ECO:0000313|EMBL:KJJ77859.1}; EC=3.1.3.- {ECO:0000313|EMBL:KJJ77859.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMI2_9CLOT
cof family hydrolase
L3_083_119G1_scaffold_99_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19643..21067)
DNA (1425bp) protein (475aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein n=2 Tax=Clostridium clostridioforme RepID=N9XF31_9CLOT
sn-glycerol 3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ13981.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_083_119G1_scaffold_99_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21117..22028)
DNA (912bp) protein (304aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFD2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ58920.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_083_119G1_scaffold_99_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22028..22894)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97254.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_083_119G1_scaffold_99_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22912..24048)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97253.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC transporter
L3_083_119G1_scaffold_99_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24256..24654)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43241.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_119G1_scaffold_99_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24744..26465)
DNA (1722bp) protein (574aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YY00_9CLOT
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:ENZ16908.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_083_119G1_scaffold_99_26
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26771..27481)
DNA (711bp) protein (237aa)
GntR family transcriptional regulator n=8 Tax=Clostridium RepID=N9VZD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62613.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transcriptional regulator, GntR family
L3_083_119G1_scaffold_99_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27536..29305)
DNA (1770bp) protein (590aa)
Oleate hydratase {ECO:0000313|EMBL:KJJ77852.1}; EC=4.2.1.53 {ECO:0000313|EMBL:KJJ77852.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RW87_9CLOT
67 kDa myosin-cross-reactive antigen family protein
L3_083_119G1_scaffold_99_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29362..30237)
DNA (876bp) protein (292aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISG6_9CLOT
dimethyladenosine transferase
L3_083_119G1_scaffold_99_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30346..31119)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2H4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43246.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
TatD family hydrolase
L3_083_119G1_scaffold_99_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31325..33307)
DNA (1983bp) protein (661aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMD6_9CLOT
Displaying items 1-30 of 76 in total

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