ggKbase home page

L3_083_119G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_110_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

422..1096
DNA (675bp) protein (225aa)
5'-nucleotidase (Nucleoside 5'-monophosphate phosphohydrolase) n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7INA4_9BACE
5'-nucleotidase (Nucleoside 5'-monophosphate phosphohydrolase) {ECO:0000313|EMBL:EFI10831.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
HAD family phosphatase
L3_083_119G1_scaffold_110_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1102..1719)
DNA (618bp) protein (206aa)
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides RepID=C7X6H5_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFK64576.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
RNA polymerase ECF-type sigma factor
L3_083_119G1_scaffold_110_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2119..3696
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X6H4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU53494.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_083_119G1_scaffold_110_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3716..5098
DNA (1383bp) protein (461aa)
Oxidoreductase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7INA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85443.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
dehydrogenase exo-alpha-sialidase
L3_083_119G1_scaffold_110_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5111..6049
DNA (939bp) protein (313aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X6H2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85442.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_119G1_scaffold_110_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6054..6761
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X6H1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85441.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_119G1_scaffold_110_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6771..7352
DNA (582bp) protein (194aa)
Transcriptional regulator, LuxR family n=4 Tax=Bacteroidales RepID=C7X6H0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19768.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
transcriptional regulator
L3_083_119G1_scaffold_110_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7459..9783
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z3U2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85439.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent outer membrane protein
L3_083_119G1_scaffold_110_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9877..10464)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AWR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28060.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
wcfS; undecaprenyl-phosphate galactose phosphotransferase
L3_083_119G1_scaffold_110_10
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10479..11684)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AW66_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28061.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
UDP-bacillosamine synthetase
L3_083_119G1_scaffold_110_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11719..12906)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZM89_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28062.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_119G1_scaffold_110_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12930..13838)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BIY9_9PORP
Lipopolysaccharide cholinephosphotransferase {ECO:0000313|EMBL:KEJ85434.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
lipopolysaccharide biosynthesis protein
L3_083_119G1_scaffold_110_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13841..15211)
DNA (1371bp) protein (457aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Parabacteroides sp. D25 RepID=K6AJ65_9PORP
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KEJ85433.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
pyrophosphorylase
L3_083_119G1_scaffold_110_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15208..16224)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AWS2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85432.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_083_119G1_scaffold_110_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16285..17751)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AW70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28066.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_119G1_scaffold_110_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17865..19469)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZM95_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28067.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
flippase
L3_083_119G1_scaffold_110_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20522..22093)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BIZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85427.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_083_119G1_scaffold_110_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22368..24278)
DNA (1911bp) protein (637aa)
Putative nucleotide-diphosphate sugar epimerase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII6_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85426.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
nucleotide-diphosphate sugar epimerase
L3_083_119G1_scaffold_110_19
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24298..24678)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LII5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85425.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_119G1_scaffold_110_20
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24718..25773)
DNA (1056bp) protein (352aa)
Putative transcriptional regulator UpxY-like protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII4_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85424.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transcriptional regulator UpxY-like protein
L3_083_119G1_scaffold_110_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26281..27213)
DNA (933bp) protein (311aa)
Integrase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII1_PARD8
integrase
Uncharacterized protein {ECO:0000313|EMBL:KEJ85423.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_119G1_scaffold_110_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27301..27690
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LII0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45494.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_119G1_scaffold_110_23
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27704..27886
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7X6E6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85421.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_119G1_scaffold_110_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28052..29386
DNA (1335bp) protein (445aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=5 Tax=Bacteroidales RepID=A6LIH9_PARD8
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_119G1_scaffold_110_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29561..30991
DNA (1431bp) protein (477aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LIH8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN20254.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_119G1_scaffold_110_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30988..31725
DNA (738bp) protein (246aa)
Mannose-1-phosphate guanyltransferase n=9 Tax=Bacteroidales RepID=A6LIH7_PARD8
mannose-1-phosphate guanylyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:EFK64545.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_119G1_scaffold_110_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31741..32772
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCW7_9BACE
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEY83142.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
endonuclease/exonuclease/phosphatase
L3_083_119G1_scaffold_110_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32853..35807)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AJ75_9PORP
phosphoenolpyruvate synthase
Uncharacterized protein {ECO:0000313|EMBL:EKN28079.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_119G1_scaffold_110_29
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36003..37337
DNA (1335bp) protein (445aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=6 Tax=Bacteroidales RepID=A6LIH4_PARD8
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_119G1_scaffold_110_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37436..37993)
DNA (558bp) protein (186aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=7 Tax=Bacteroidales RepID=C7X6D9_9PORP
Displaying items 1-30 of 146 in total

View Taxonomy