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L3_083_119G1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_120_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(89..391)
DNA (303bp) protein (101aa)
Predicted transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6M9_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL00492.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_083_119G1_scaffold_120_2
Scardovia wiggsiae, Scardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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699..1589
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Scardovia wiggsiae F0424 RepID=J0DEF9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EJD64668.1}; TaxID=857290 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Scardovia.;" source="Scardovia wiggsiae F0424.;"
Transcriptional regulator
L3_083_119G1_scaffold_120_3
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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1698..2417
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25194.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Esterase/lipase
L3_083_119G1_scaffold_120_4
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2530..3597
DNA (1068bp) protein (356aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JT99_9FIRM
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDE66072.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Aldo/keto reductases, related to diketogulonate reductase
L3_083_119G1_scaffold_120_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3744..4193
DNA (450bp) protein (150aa)
Flavin reductase n=2 Tax=Ruminococcus lactaris RepID=B5CNB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23697.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_083_119G1_scaffold_120_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4199..4684
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72868.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
flavodoxin
L3_083_119G1_scaffold_120_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4636..5571
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31412.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Esterase/lipase
L3_083_119G1_scaffold_120_8
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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5731..6741
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25191.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_083_119G1_scaffold_120_9
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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6840..8009
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8N4_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03685.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_083_119G1_scaffold_120_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8036..8722
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12860.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_119G1_scaffold_120_11
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8770..9426
DNA (657bp) protein (219aa)
Flavodoxin family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCB6_9CLOT
Flavodoxin family protein {ECO:0000313|EMBL:EFE12862.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_119G1_scaffold_120_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9442..10077
DNA (636bp) protein (212aa)
NADPH-dependent FMN reductase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBC9_9CLOT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDD75391.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
NADPH-dependent FMN reductase
L3_083_119G1_scaffold_120_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10093..11256
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12858.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
alpha/beta hydrolase
L3_083_119G1_scaffold_120_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11260..12117
DNA (858bp) protein (286aa)
Site-specific recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSK3_9CLOT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD44056.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_083_119G1_scaffold_120_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12401..14398
DNA (1998bp) protein (666aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITW2_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
excinuclease ABC, B subunit
L3_083_119G1_scaffold_120_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14543..15724
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97734.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative cell wall binding repeat.
L3_083_119G1_scaffold_120_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15878..16789)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43804.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_119G1_scaffold_120_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17347..18375
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43812.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Bacterial SH3 domain.
L3_083_119G1_scaffold_120_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18434..19471
DNA (1038bp) protein (346aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5INR1_9CLOT
L3_083_119G1_scaffold_120_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19889..20698
DNA (810bp) protein (270aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Pseudouridine synthase n=3 Tax=Clostridium bolteae RepID=A8RIE7_9CLOT
pseudouridine synthase
L3_083_119G1_scaffold_120_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20715..22667
DNA (1953bp) protein (651aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J463_9CLOT
L3_083_119G1_scaffold_120_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22704..23621
DNA (918bp) protein (306aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=3 Tax=Clostridium RepID=R0BEI6_9CLOT
L3_083_119G1_scaffold_120_23
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23772..23966
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XPS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06452.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_083_119G1_scaffold_120_24
unknown

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24075..24197
DNA (123bp) protein (41aa)

This feature has no annotations

L3_083_119G1_scaffold_120_25
unknown

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24148..24333
DNA (186bp) protein (62aa)

This feature has no annotations

L3_083_119G1_scaffold_120_26
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24374..26101
DNA (1728bp) protein (576aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Potassium-transporting ATPase A chain n=2 Tax=Blautia RepID=C0CS40_9FIRM
potassium-transporting ATPase subunit A
L3_083_119G1_scaffold_120_27
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26130..28184
DNA (2055bp) protein (685aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Potassium-transporting ATPase B chain n=2 Tax=Blautia RepID=C0CS39_9FIRM
kdpB; potassium-transporting ATPase subunit B
L3_083_119G1_scaffold_120_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28225..28863
DNA (639bp) protein (213aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Potassium-transporting ATPase C chain n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZK58_9FIRM
kdpC; potassium-transporting ATPase subunit C
L3_083_119G1_scaffold_120_29
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28874..30934
DNA (2061bp) protein (687aa)
sensor protein KdpD (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CS36_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47409.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_083_119G1_scaffold_120_30
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30931..32889
DNA (1959bp) protein (653aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XDF0_9FIRM
Displaying items 1-30 of 76 in total

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