ggKbase home page

L3_083_119G1_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_123_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97..1605
DNA (1509bp) protein (503aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=2 Tax=Lachnospiraceae RepID=A7B787_RUMGN
L3_083_119G1_scaffold_123_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1602..2525
DNA (924bp) protein (308aa)
Transcriptional regulator, LacI family n=2 Tax=Lachnospiraceae RepID=A7B786_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49104.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LacI family transcriptional regulator
L3_083_119G1_scaffold_123_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2838..4172
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JVL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49103.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
maltose:maltodextrin transport system permease
L3_083_119G1_scaffold_123_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4183..5001
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=2 Tax=Lachnospiraceae RepID=A7B783_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49102.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
maltose:maltodextrin transport system permease
L3_083_119G1_scaffold_123_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5025..6296
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JVK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49101.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
extracellular solute-binding protein
L3_083_119G1_scaffold_123_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6308..8161
DNA (1854bp) protein (618aa)
neopullulanase (EC:3.2.1.135)
Alpha amylase, catalytic domain protein n=2 Tax=Lachnospiraceae RepID=A7B781_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49100.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_119G1_scaffold_123_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8302..9744
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JVK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49099.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted dehydrogenase
L3_083_119G1_scaffold_123_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9731..11005
DNA (1275bp) protein (425aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B779_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN76341.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_083_119G1_scaffold_123_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11007..11375
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B778_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49097.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein with conserved CXXC pairs
L3_083_119G1_scaffold_123_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11470..14397
DNA (2928bp) protein (976aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNG9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16322.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted Zn-dependent peptidases, insulinase-like
L3_083_119G1_scaffold_123_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14428..15327
DNA (900bp) protein (300aa)
GTPase Era n=2 Tax=Lachnospiraceae RepID=F7JVK2_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
GTP-binding protein Era
L3_083_119G1_scaffold_123_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15428..15619
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66895.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_083_119G1_scaffold_123_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15561..16301
DNA (741bp) protein (247aa)
DNA repair protein RecO n=2 Tax=Lachnospiraceae RepID=F7JVK0_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA repair protein RecO
L3_083_119G1_scaffold_123_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16409..17800
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=4 Tax=Clostridiales RepID=A7B774_RUMGN
L3_083_119G1_scaffold_123_15
unknown

Not on your lists

17817..17960
DNA (144bp) protein (48aa)

This feature has no annotations

L3_083_119G1_scaffold_123_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18088..19872
DNA (1785bp) protein (595aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ade1; Adenine deaminase 1 (EC:3.5.4.2)
Adenine deaminase n=3 Tax=Lachnospiraceae RepID=A7B773_RUMGN
L3_083_119G1_scaffold_123_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19892..21628
DNA (1737bp) protein (579aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=3 Tax=Lachnospiraceae RepID=A7B772_RUMGN
L3_083_119G1_scaffold_123_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21658..23223
DNA (1566bp) protein (522aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNC7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16315.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
xanthine/uracil/vitamin C permease
L3_083_119G1_scaffold_123_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23380..23622
DNA (243bp) protein (81aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEX21285.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEX21285.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Cadmium-exporting ATPase n=3 Tax=Lachnospiraceae RepID=C9L9D9_BLAHA
L3_083_119G1_scaffold_123_20
unknown

Not on your lists

comp(23627..23749)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_083_119G1_scaffold_123_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23885..25465)
DNA (1581bp) protein (527aa)
Alpha-N-arabinofuranosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2W1_9FIRM
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:EGN40747.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase
L3_083_119G1_scaffold_123_22
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

25643..26521
DNA (879bp) protein (293aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WAN3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC91292.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
AraC family transcriptional regulator
L3_083_119G1_scaffold_123_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

26634..28478
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VGA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91291.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L3_083_119G1_scaffold_123_24
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

28499..31939
DNA (3441bp) protein (1147aa)
Beta-galactosidase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V2N0_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDC91290.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
glycoside hydrolase family protein
L3_083_119G1_scaffold_123_25
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

32087..33058
DNA (972bp) protein (324aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VAF4_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC91289.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
protein lplB
L3_083_119G1_scaffold_123_26
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

33073..33945
DNA (873bp) protein (291aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6UZD9_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC91288.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
binding-protein-dependent transport system inner membrane protein
L3_083_119G1_scaffold_123_27
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

34002..35684
DNA (1683bp) protein (561aa)
Extracellular solute-binding domain protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WAM9_9FIRM
Extracellular solute-binding domain protein {ECO:0000313|EMBL:CDC91287.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
sugar ABC transporter substrate-binding protein
L3_083_119G1_scaffold_123_28
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

35764..38814
DNA (3051bp) protein (1017aa)
Putative secreted protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VGA4_9FIRM
Putative secreted protein {ECO:0000313|EMBL:CDC91286.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L3_083_119G1_scaffold_123_29
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

38756..39793
DNA (1038bp) protein (346aa)
sorbitol dehydrogenase (EC:1.1.1.14)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V2M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91285.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_083_119G1_scaffold_123_30
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

39846..41954
DNA (2109bp) protein (703aa)
beta-glucosidase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VAF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91284.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Displaying items 1-30 of 68 in total

View Taxonomy