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L3_083_119G1_scaffold_146

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_146_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(439..1803)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=3 Tax=Lachnospiraceae RepID=A7B0M9_RUMGN
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA repair protein RadA
L3_083_119G1_scaffold_146_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1897..2310)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B0M8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78694.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_083_119G1_scaffold_146_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2411..4852)
DNA (2442bp) protein (814aa)
ATPase family associated with various cellular activities (AAA) n=3 Tax=Lachnospiraceae RepID=A7B0M7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17055.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPases with chaperone activity, ATP-binding subunit
L3_083_119G1_scaffold_146_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4865..5233)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridiales RepID=A7B0M6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47340.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, GntR family
L3_083_119G1_scaffold_146_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5345..6202)
DNA (858bp) protein (286aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Diaminopimelate epimerase n=3 Tax=Lachnospiraceae RepID=A7B0M4_RUMGN
diaminopimelate epimerase
L3_083_119G1_scaffold_146_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6346..7191
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7B0M3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17052.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC family transcriptional regulator
L3_083_119G1_scaffold_146_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7179..8507)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B0M2_RUMGN
L3_083_119G1_scaffold_146_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8497..9177)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=A7B0M1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17050.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_083_119G1_scaffold_146_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9198..9854)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Lachnospiraceae RepID=F7JXV3_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
phosphate uptake regulator, PhoU
L3_083_119G1_scaffold_146_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9858..10607)
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B0L9_RUMGN
L3_083_119G1_scaffold_146_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10625..11485)
DNA (861bp) protein (287aa)
Phosphate ABC transporter, permease protein PstA n=3 Tax=Lachnospiraceae RepID=A7B0L8_RUMGN
Phosphate ABC transporter {ECO:0000313|EMBL:EGN47347.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_083_119G1_scaffold_146_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11478..12371)
DNA (894bp) protein (298aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Clostridiales RepID=A7B0L7_RUMGN
Phosphate ABC transporter {ECO:0000313|EMBL:EGN47348.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_083_119G1_scaffold_146_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12391..13311)
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BQG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47349.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_083_119G1_scaffold_146_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13534..15171)
DNA (1638bp) protein (546aa)
Na/Pi-cotransporter II-like protein n=3 Tax=Lachnospiraceae RepID=A7B0L4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17044.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Na/Pi-cotransporter II-like protein
L3_083_119G1_scaffold_146_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15285..15641)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=3 Tax=Lachnospiraceae RepID=V8BPD6_RUMGN
Putative stage V sporulation protein AE {ECO:0000313|EMBL:EDN78679.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
stage V sporulation protein AE
L3_083_119G1_scaffold_146_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15660..16670)
DNA (1011bp) protein (337aa)
Stage V sporulation protein AD n=3 Tax=Lachnospiraceae RepID=A7B0L2_RUMGN
Stage V sporulation protein AD {ECO:0000313|EMBL:EDN78678.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Stage V sporulation protein AD (SpoVAD).
L3_083_119G1_scaffold_146_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16828..17286
DNA (459bp) protein (153aa)
Stage V sporulation protein AC n=3 Tax=Lachnospiraceae RepID=V8BRE7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47354.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
SpoVA protein.
L3_083_119G1_scaffold_146_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17329..18276)
DNA (948bp) protein (316aa)
CobW/P47K family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0L0_RUMGN
CobW/P47K family protein {ECO:0000313|EMBL:EDN78676.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
cobalamin synthesis protein P47K
L3_083_119G1_scaffold_146_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18294..19355)
DNA (1062bp) protein (354aa)
NADP-dependent alcohol dehydrogenase n=3 Tax=Clostridiales RepID=F7JXW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17039.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
tdh; threonine dehydrogenase-like Zn-dependent dehydrogenase
L3_083_119G1_scaffold_146_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19463..19873)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0K8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47357.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_119G1_scaffold_146_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19833..20498)
DNA (666bp) protein (222aa)
Stage V sporulation protein AA n=2 Tax=Lachnospiraceae RepID=A7B0K7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47358.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Stage V sporulation protein AA.
L3_083_119G1_scaffold_146_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20488..20649)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47359.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_119G1_scaffold_146_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20728..21444)
DNA (717bp) protein (239aa)
RNA polymerase sigma factor n=3 Tax=Lachnospiraceae RepID=A7B0K5_RUMGN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma-F factor
L3_083_119G1_scaffold_146_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21423..21878)
DNA (456bp) protein (152aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=3 Tax=Lachnospiraceae RepID=A7B0K4_RUMGN
Anti-sigma F factor {ECO:0000313|EMBL:EGN47361.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_119G1_scaffold_146_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21875..22231)
DNA (357bp) protein (119aa)
Anti-sigma factor antagonist n=4 Tax=Clostridiales RepID=A7B0K3_RUMGN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
anti-anti-sigma factor
L3_083_119G1_scaffold_146_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22300..23655)
DNA (1356bp) protein (452aa)
Tetratricopeptide repeat protein n=3 Tax=Lachnospiraceae RepID=A7B0K1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47364.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_119G1_scaffold_146_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23674..23811)
DNA (138bp) protein (46aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0K0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47365.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_083_119G1_scaffold_146_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23811..25103)
DNA (1293bp) protein (431aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPK8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47366.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_083_119G1_scaffold_146_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25096..27330)
DNA (2235bp) protein (745aa)
Arylsulfatase n=3 Tax=Lachnospiraceae RepID=A7B0J8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47367.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_083_119G1_scaffold_146_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27343..29991)
DNA (2649bp) protein (883aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Lachnospiraceae RepID=F7JXX6_9FIRM
Displaying items 1-30 of 66 in total

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