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L3_083_119G1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_119G1_scaffold_315_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(143..418)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B303_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22509.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
DNA invertase
L3_083_119G1_scaffold_315_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(425..589)
DNA (165bp) protein (55aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LR28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86406.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_315_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(969..1574)
DNA (606bp) protein (202aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LR29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22507.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_083_119G1_scaffold_315_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1674..2672)
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B306_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22506.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
DNA-binding protein
L3_083_119G1_scaffold_315_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2685..2897)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LR31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86409.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_083_119G1_scaffold_315_6
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3272..4150)
DNA (879bp) protein (293aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LR32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22504.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
methionine sulfoxide reductase A
L3_083_119G1_scaffold_315_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4412..5743)
DNA (1332bp) protein (444aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Erysipelotrichaceae RepID=H1B309_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EHO22503.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
TrmA family RNA methyltransferase
L3_083_119G1_scaffold_315_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5780..6376)
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VT84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22502.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_083_119G1_scaffold_315_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6642..8066)
DNA (1425bp) protein (475aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
gatB; glutamyl-tRNA(Gln) amidotransferase GatB (EC:6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UKV7_9FIRM
L3_083_119G1_scaffold_315_10
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8063..9484)
DNA (1422bp) protein (474aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase A subunit n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UWG3_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase A subunit {ECO:0000313|EMBL:CDC86414.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_083_119G1_scaffold_315_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9486..9779)
DNA (294bp) protein (98aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit {ECO:0000313|EMBL:EQJ62920.1}; EC=6.3.5.- {ECO:0000313|EMBL:EQJ62920.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=7 Tax=Firmicutes RepID=E4LRA4_9CLOT
L3_083_119G1_scaffold_315_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9963..11087)
DNA (1125bp) protein (375aa)
CamS sex pheromone family protein n=6 Tax=Firmicutes RepID=E4LRA5_9CLOT
CamS sex pheromone cAM373 family protein {ECO:0000313|EMBL:EQJ62921.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Protein involved in sex pheromone biosynthesis
L3_083_119G1_scaffold_315_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11071..13068)
DNA (1998bp) protein (666aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=4 Tax=Firmicutes RepID=E4LRA6_9CLOT
L3_083_119G1_scaffold_315_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13079..15370)
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
UvrD/REP helicase n=3 Tax=Firmicutes RepID=E4LRA7_9CLOT
pcrA; ATP-dependent DNA helicase PcrA
L3_083_119G1_scaffold_315_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15562..17145
DNA (1584bp) protein (528aa)
Cell envelope-like function transcriptional attenuator common domain protein n=5 Tax=Firmicutes RepID=E4LRA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86419.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
cell envelope-related function transcriptional attenuator common domain
L3_083_119G1_scaffold_315_16
unknown

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comp(17093..17323)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_083_119G1_scaffold_315_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17528..18346
DNA (819bp) protein (273aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=4 Tax=Firmicutes RepID=E4LRA9_9CLOT
L3_083_119G1_scaffold_315_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18358..19032
DNA (675bp) protein (225aa)
Nicotinamide mononucleotide transporter PnuC n=5 Tax=Firmicutes RepID=E4LRB0_9CLOT
Nicotinamide mononucleotide transporter PnuC family protein {ECO:0000313|EMBL:EQJ62926.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transporter
L3_083_119G1_scaffold_315_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19095..19730
DNA (636bp) protein (212aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Firmicutes RepID=E4LRB1_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EQJ62927.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cyclic nucleotide-binding protein
L3_083_119G1_scaffold_315_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20100..21110)
DNA (1011bp) protein (337aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Firmicutes RepID=E4LRB2_9CLOT
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQJ62928.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
oxidoreductase domain-containing protein
L3_083_119G1_scaffold_315_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21234..22622)
DNA (1389bp) protein (463aa)
PTS system Galactitol-specific IIC component n=4 Tax=Firmicutes RepID=E4LRB3_9CLOT
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQJ62929.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sgcC; hypothetical protein
L3_083_119G1_scaffold_315_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22651..22926)
DNA (276bp) protein (92aa)
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFR38673.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFR38673.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Firmicutes RepID=E4LRB4_9CLOT
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_083_119G1_scaffold_315_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22948..23418)
DNA (471bp) protein (157aa)
PTS system transporter subunit IIA (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Firmicutes RepID=E4LRB5_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ62931.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_083_119G1_scaffold_315_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23387..23878)
DNA (492bp) protein (164aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Firmicutes RepID=E4LRB6_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ62932.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ptsN1; phosphotransferase enzyme II, A component
L3_083_119G1_scaffold_315_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24003..26027)
DNA (2025bp) protein (675aa)
PRD domain protein n=2 Tax=Clostridiales RepID=E4LRB7_9CLOT
PRD domain protein {ECO:0000313|EMBL:EFR38712.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
putative PRD domain protein
L3_083_119G1_scaffold_315_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26218..27819
DNA (1602bp) protein (534aa)
Cell envelope-like function transcriptional attenuator common domain protein n=3 Tax=Firmicutes RepID=E4LRB8_9CLOT
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EQJ62934.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cell envelope-related function transcriptional attenuator common domain
L3_083_119G1_scaffold_315_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28017..29252)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ62935.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_083_119G1_scaffold_315_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29294..29974)
DNA (681bp) protein (227aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38711.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_083_119G1_scaffold_315_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30015..31172)
DNA (1158bp) protein (386aa)
Threonine/alanine tRNA ligase second additional domain protein n=5 Tax=Firmicutes RepID=E4LRC1_9CLOT
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EFR38771.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DHH domain-containing protein
L3_083_119G1_scaffold_315_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31296..32177
DNA (882bp) protein (294aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86433.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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